Small Tributaries Pollutants of Concern Reconnaissance Monitoring: Loads and Yields-based Prioritization Methodology Pilot Study

San Francisco Estuary Institute (SFEI) | October 1st, 2019

Watershed yields (mass exported per unit watershed area) can be used as an indicator variable to help identify watersheds or source areas of higher management interest i

Watershed yields (mass exported per unit watershed area) can be used as an indicator variable to help identify watersheds or source areas of higher management interest in relation to mass loads that impact the Bay. When prioritization includes an analysis of uncertainty, a recommendation can also be made for priority investigations necessary to reduce uncertainties. A method is presented for generating comparable yield estimates for small industrial watersheds where only a single storm has been sampled and for which a watershed boundary has been generated. The method generates standardized storm-based yields for each sampled site for a 0.5-year annual return frequency storm with 2-hour peak rainfall intensity. No attempt has been made to estimate annual average yields (the metric upon which the TMDL was based).

Small Tributaries Pollutants of Concern Reconnaissance Monitoring: Pilot Evaluation of Source Areas Using PCB Congener Data

San Francisco Estuary Institute (SFEI) | October 1st, 2019

PCB congener profiles can be used to help identify source areas that contribute most to the PCB mass exported from the watershed via stormwater and to illustrate variabi

PCB congener profiles can be used to help identify source areas that contribute most to the PCB mass exported from the watershed via stormwater and to illustrate variability in PCB mobilization from source areas over time. A method is presented for estimating the contributions of different Aroclor mixtures to the congener profiles of samples of stormwater and sediment. The method is based on the use of indicator congeners that are representative of each of the four most commonly used Aroclors. In this report, the method was applied in three watersheds. In the Pulgas Pump Station watershed, stormwater and sediment had high concentrations with a unique congener profile, dominated by congeners indicative of a combination of Aroclors 1242 and 1260. The concentrations and congener profiles in sediment suggest that there are two distinct source areas in the watershed that combine to create the mix of 1242 and 1260 that is dominant in stormwater at the Pump Station. The data indicate that if PCB flux from one of these areas could be eliminated, loads from the watershed would be reduced by 50% or more. For the Coyote Creek watershed, the similarity in congener profiles for the highest concentration sediment samples and the stormwater samples suggest that the important source areas in the watershed have been identified, and that reduction of loading from an area at the south end of the Charcot Avenue Storm Drain watershed would yield the greatest reduction in export at the Coyote Creek station. The concentrations and congener profiles in stormwater and sediment from the Guadalupe River watershed indicate the presence of one source area that is likely a substantial contributor to PCB export from the watershed, but that all of the significant sources areas may not yet have been identified.

Sniffing the Delta for Greenhouse Gases

San Francisco Estuary Partnership (SFEP) | June 16th, 2022

Global food production contributes an estimated 21% to 37% of the greenhouse gases that are warming the planet, including huge releases of carbon when vast aquatic ecosys

Global food production contributes an estimated 21% to 37% of the greenhouse gases that are warming the planet, including huge releases of carbon when vast aquatic ecosystems like the Delta are transformed for agriculture. [Dennis] Baldocchi and colleagues are now trying to figure out if bringing back tidal wetlands like the one at Dutch Slough can help reverse these processes.

South San Francisco Bay Salt Pond Restoration Project— A Synthesis of Phase-1 Mercury Studies

U.S. Geological Survey (USGS) | March 7th, 2023

The South Bay Salt Pond Restoration Project (SBSPRP) encompasses over 6,000 hectares of former salt production ponds along the south edge of the San Francisco Bay and rep

The South Bay Salt Pond Restoration Project (SBSPRP) encompasses over 6,000 hectares of former salt production ponds along the south edge of the San Francisco Bay and represents the largest wetland restoration effort on the west coast of North America. A series of studies associated with Phase 1 (2010–2018) restoration activities that are focused on a historically mercury contaminated slough and series of ponds within the restoration area have recently been completed. This report brings together the key findings of these loosely coordinated studies and integrates the results into a more comprehensive and holistic product that informs future restoration activities associated with the SBSPRP and elsewhere.

State Investments in Delta Levees

Delta Stewardship Council (Delta Council) | January 1st, 2015

This 43-page Issue Paper, authored by Dustin Jones, the Council's Integrated Regional Water Management Supervising Engineer, is entitled State Investments in Delta Levees

This 43-page Issue Paper, authored by Dustin Jones, the Council's Integrated Regional Water Management Supervising Engineer, is entitled State Investments in Delta Levees, Key Issues for Updating Priorities. The Delta Reform Act requires that the Delta Plan promote strategic levee investments that attempt to reduce risks to people, property, and state interests in the Delta (Water Code section 85305) and recommend priorities for state investment in levee operation, maintenance, and improvements in the Delta (Water Code section 85306). In addition, the Delta Plan may identify actions to be taken outside of the Delta, if those actions are determined to significantly reduce flood risks in the Delta and may include local plans of flood protection (Water Code section 85307(a-b)). This paper outlines 15 issues that will need to be considered as the Council updates the Delta Plan’s provisions regarding State investment in the Delta’s levees. It summarizes background information about these issues, provides references for further information, and highlights key points to be addressed through the development of the Delta Levees Investment Strategy.

State Investments in Delta Levees: Key Issues For Updating Priorities

Delta Stewardship Council (Delta Council) | January 9th, 2015

This paper outlines 15 issues that will need to be considered as the Council updates the Delta Plan’s 36 provisions regarding State investment in the Delta’s levees.

This paper outlines 15 issues that will need to be considered as the Council updates the Delta Plan’s 36 provisions regarding State investment in the Delta’s levees. It summarizes background information 37 about these issues, provides references for further information, and highlights key points that will need 38 to be addressed over the coming months.

State of Bay Delta Science 2016: Introduction

University of California, Davis (UC Davis) | July 1st, 2016

The first edition of SBDS presented seven shifts in perspective or changes in the way that scientists understood the Delta and water supply that had emerged in the decade

The first edition of SBDS presented seven shifts in perspective or changes in the way that scientists understood the Delta and water supply that had emerged in the decade before its publication (Healey et al. 2008). These changes in scientific understanding have profoundly affected the long-term vision for the Delta and the way that it is managed (Delta Vision Task Force 2008; Delta Stewardship Council 2010). A similar evolution in understanding has emerged in the eight years since publication of the first edition of SBDS, and we expect our understanding of the Delta and California water will continue to evolve and change as new studies are conducted. SBDS will be a living document, updated from time to time as sufficient new findings accumulate and, in particular, as the effects of climate change become more apparent. Meeting the new and unprecedented challenges to water supply and ecosystem conservation that climate change will bring will require both an intensification of scientific effort and much better coordination and planning of Delta science. The papers that make up the second edition of SBDS represent one step toward an integrated and policy-relevant compilation of science in the Delta.

State of the Estuary 2019 Update

San Francisco Estuary Partnership (SFEP) | October 22nd, 2019

The San Francisco Estuary is a large and diverse system. Hundreds of miles of coastline stretch from the wide valleys of the Sacramento and San Joaquin Rivers to the stee

The San Francisco Estuary is a large and diverse system. Hundreds of miles of coastline stretch from the wide valleys of the Sacramento and San Joaquin Rivers to the steep headlands of the Golden Gate, with vast agricultural fields in the Delta and urbanized shorelines in Silicon Valley and many of the region’s cities. The complexity and scale of this system means it can take years to detect and assess changes. This interim State of the Estuary Report checks in on a few indicators of health and explores where the assessment should head over time. In the four years since the 2015 State of the Estuary Report, two issues have emerged as critical to how we assess the health of the estuarine ecosystem at the heart of the Bay Area and the Delta. First, the health of the Estuary and of the people who live near it and depend on it are inextricably linked. We need a healthy Bay and Delta to protect our shorelines from sea level rise, help keep our waters clean, provide food and habitat for fish and wildlife, and give people a place to enjoy nature. We also need to think more about human communities as we assess the health of natural communities. This focus means addressing environmental injustices that are deeply embedded in our culture and patterns of development. The second critical issue to emerge is the need for a greater focus on landscape resilience—how well the Bay and the Delta are equipped to respond to change—so that people and wildlife can thrive as climate change progresses. Taking these two ideas together, this report focuses on the nexus of social and ecological resilience as we look toward the future. The first section of the Report updates indicators of ecological health that span the entire extent of the San Francisco Estuary (Bay and Delta). Recent data show continued progress along the trajectories of the past decade. Tidal marsh restoration is proceeding at a brisk pace in the Bay and gaining traction in the Delta, while urban water conservation continues to meet mandated benchmarks, even during the drought. On the other hand, flows through the Estuary and across its floodplains continue to be well below levels that could increase and restore ecosystem health. Freshwater flows are a lynchpin of ecosystem processes that sustain physical habitats, fuel the food web, and regulate water quality. Creative approaches to using and re-using fresh water for environmental purposes are needed. Long-term trend analysis shows that fish communities in the Bay are declining. This analysis scores an index of 10 attributes of a healthy fish community. The index focuses on fish in offshore areas, and may not capture benefits to fish from near-shore wetland restoration projects. Despite this slow decline, fish communities in the saltier parts of the Estuary remain in good condition, while those in the brackish and freshwater areas are in poor condition. The next section of the report discusses three emerging indicators of Estuary health, offering options for how to assess resilience in future reports. Here, for the first time, the resilience of the Estuary’s shores is evaluated through the lens of subsidence and nature-based features. Elevation relative to sea level is a basic currency that must be tracked as the Pacific Ocean rises into the Estuary. The potential for the Estuary shore to be resilient to climate change and continue to provide benefits to people is related to how much of the shore zone is nature-based. The final emerging indicator, urban green space, is a first attempt to assess how access to nature is distributed across more and less advantaged communities. More work is needed to finalize all these emerging indicators before they can be included in any future quantitative assessment of the State of the Estuary. These emerging and updated indicators will help focus efforts to restore the Estuary’s health. In addition to continuing the successful aspects of restoration and conservation that this report describes, we need more investment in creative ways to use and restore flows for environmental health, to expand and build resilient shorelines and to weave considerations of social equity more strongly into efforts to improve environmental health. - J. Letitia Grenier, Lead Scientist

State of the Estuary, October 2013

San Francisco Estuary Partnership (SFEP) | October 31st, 2013

State of the Salmonids: Status of California’s Emblematic Fishes 2017

University of California, Davis (UC Davis) | August 1st, 2017

California has, or had, 32 distinct kinds of salmonid fishes. They are either endemic to California or at the southern end of their ranges. Most are in serious decline:

California has, or had, 32 distinct kinds of salmonid fishes. They are either endemic to California or at the southern end of their ranges. Most are in serious decline: 45% and 74% of all salmonids will likely become extirpated from California in the next 50 and 100 years, respectively, if present trends continue. Our results suggest that California will lose more than half (52%) of its native anadromous salmonids and nearly a third (30%) of its inland taxa in just 50 years under current conditions. Climate change is a major overarching threat driving population declines throughout California and strongly affects the status of 84% of all salmonids reviewed. In addition, dams, agricultural operations, estuary alteration, non-native species, production hatcheries, and myriad other human-induced threats have contributed to declines. 81% of salmonids in California are now worse off than they were in 2007, when the previous version of this report was prepared. The changes in species status are the result of the 2012-2016 historic drought, improved data collection and review, and an improved understanding of climate change impacts. Returning these iconic species to sustainable levels requires access to productive and diverse habitats which promote the full range of life history diversity necessary to weather change. We recommend (i) protecting and investing in fully functioning watersheds such as the Smith River and Blue Creek, (ii) protecting and restoring source waters such as Sierra meadow systems, groundwater, and springs so that the impacts of climate change are reduced, (iii) restoring function and access to once productive and diverse habitats such as Central Valley floodplains, coastal lagoons, and estuaries, (iv) adopting reconciliation ecology as a basis for management in human dominated landscapes, (v) improving habitat connectivity and passage to historical spawning and rearing habitat, and (vi) improving salmonid genetic management throughout California.