Groundwater and Stream Interaction in California's Central Valley: Insights for Sustainable Groundwater Management

Nature Conservancy | June 16th, 2016

Sustainable water management requires ensuring ecosystem water needs are met in balance with water needs for people. The Nature Conservancy (TNC) is working across Califo

Sustainable water management requires ensuring ecosystem water needs are met in balance with water needs for people. The Nature Conservancy (TNC) is working across California to demonstrate how to achieve this balance in the context of integrated water management programs. Sustainable water management must also recognize that surface water and groundwater resources are interconnected and that proper management of these resources includes understanding this interaction and managing the resources accordingly. Management of groundwater and surface water systems in an integrated manner is impeded by California water law and policy, which has separate rules and regulations for managing groundwater and surface water resources. The Central Valley of California is the hub of the state’s water supply system. An extensive network of dams and canals supplies surface water to users within the Central Valley as well as to the San Francisco Bay Area, the Central Coast, and Southern California. Analysis of information collected in this study reveals that just within the Central Valley, agricultural and urban sectors use an average of 13 million acre-feet (MAF) of surface water and over 8 MAF of groundwater per year. Approximately 2 MAF of water is exported annually to areas outside the Central Valley. Because the availability of surface water supplies varies significantly from year to year, groundwater use also varies considerably on annual basis. In an average year, groundwater meets about 40% of the state’s water demand and up to 60% or more during droughts, when groundwater provides a water supply buffer against economic and environmental harm from water scarcity (DWR, 2014). In some areas, groundwater provides 100% of the supply, even in wetter years, and then is heavily pumped during drought. In other locations, where surface water supplies are reasonably abundant, groundwater use may be relatively light during wetter years, but more heavily pumped during drier years when surface water supplies are cut back. Accordingly, the impact of groundwater use is much more evident during dry years, and especially in drought conditions. A case in point is the drought condition of 2013-15. This drought is exerting significant stress on the state’s water supply. The surface water deliveries have been reduced dramatically, to near zero in many regions; therefore, agricultural and municipal water users in the Central Valley and other parts of the state that normally rely on surface water for much of their supplies, are now greatly increasing their use of groundwater to meet their needs. A 2014 UC Davis report indicates that expected increase in Central Valley groundwater pumping would be in the range of 20% to 25%, during the 2014 irrigation season. To the authors’ knowledge, there are no reports of actual estimates of increase in groundwater use for the recent drought conditions. The long-term increase in groundwater pumping and especially recent drought related increases in pumping would translate into significantly more adverse impacts on the surface water and stream systems, as well as groundwater dependent ecosystems. In addition, this increase in groundwater pumping could potentially result in more land subsidence throughout the valley. The drought has also affected the irrigated lands under cultivation. A November 2014 DWR publication “Public Update for Drought Response” 3 reported that based on NASA satellite imagery, approximately 700,000 acres of land were estimated idled between 2011 and 2014. Majority of these acreages idled are reported to be due to the drought conditions, although, some were also due to normal agronomic practices, crop markets, and other reasons. This report provides the results of a number of analyses and evaluations of Central Valley hydrologic conditions using the California Central Valley Groundwater-Surface Water Simulation Model (C2VSim). The study examines important hydrologic and operational characteristics and behaviors of the California’s Central Valley water system during the historical development in the Valley. In addition, the study presents results of model simulations conducted to assess potential impacts of several water management scenarios. The results of this study contribute significantly to the understanding of how management of groundwater and surface water are interrelated and will inform the development of more effective integrated water management in the Central Valley and throughout California. The interaction between groundwater and surface water resources has been evaluated and illustrated by many researchers. As early as 1941, Theis (1941) documented the hydraulic connection between stream and aquifer systems and quantitatively described the general behavior of stream-groundwater systems. Many others, including Glover & Balmer (1954) and Hantush (1965) built on Theis’ work, which demonstrated and confirmed the basic principles of hydraulic connection between stream and aquifer systems. In recent years, significant work has been conducted regarding regional impacts of groundwater pumping and operation on regional surface water systems. For example, the recent USGS study (Barlow & Leake, 2012) presents original findings of the stream-aquifer interaction in the context of sustainable groundwater management. In an effort to quantify the interaction between the groundwater and the surface water system, DWR’s C2VSim model was employed in this study. The C2VSim model was originally developed in 1990 for DWR, U. S. Bureau of Reclamation (USBR), and California State Water Resources Control Board (SWRCB) as the Central Valley Groundwater and Surface water Model (CVGSM) (James M. Montgomery Consulting Engineers, 1990a). Subsequently, the model was enhanced through numerous key applications, including the Central Valley Project Improvement Act – Programmatic Environmental Impact Statement (CVPIA-PEIS). In 2005, the CVGSM model was upgraded to the newly developed Integrated Water Flow Model (IWFM) platform, and was renamed the C2VSim model. The detailed features of the model are described and presented in Section 2 of this report. The C2VSim model is a leading Central Valley-wide integrated hydrologic model adopted by DWR and many other regional and state-wide agencies, as well as non-governmental organizations (NGOs) to evaluate various water management scenarios throughout the Valley. This report is organized in six sections: Section 1: Provides the background information and lays out the goals and objectives of this study. Section 2: Provides information on the status of C2VSim model, refinements made during this study, and assumptions on the modeling analysis. Section 3: Discusses simulation of the historical hydrologic conditions in the Central Valley. Section 4: Provides the assumptions and results of the existing baseline conditions, assuming that no changes to the facilities and their operations, as well as water management actions, take place over the course of a predetermined hydrologic condition. Section 5: Provides a description of three water management scenarios that may have major impacts on the future of surface water and groundwater interaction in Central Valley. Results of simulation of these management scenarios are presented and discussed in detail. Section 6: Provides conclusions from this study and a list of recommendations for future work.

Groundwater and Urban Growth in the San Joaquin Valley

Public Policy Institute of California (PPIC) | September 20th, 2021

The San Joaquin Valley is ground zero for the Sustainable Groundwater Management Act (SGMA). It has the largest groundwater deficit in California and faces some of the

The San Joaquin Valley is ground zero for the Sustainable Groundwater Management Act (SGMA). It has the largest groundwater deficit in California and faces some of the worst impacts from overdraft, including land subsidence and drying wells. SGMA will help the region address these issues—while also building its climate resilience. But this will require hard work, not only by farmers—the largest groundwater users—but also by the valley’s urban water utilities, which serve a growing population while relying mostly on groundwater. As the valley confronts limits on groundwater pumping, urban utilities, local land use authorities, other water users, and state agencies must all engage to ensure a smooth transition for the region’s residents.

Groundwater Conditions Report Water Year 2021

California Department of Water Resources (DWR) | March 15th, 2022

Groundwater Contributions of Flow, Nitrate, and Dissolved Organic Carbon to the Lower San Joaquin River, California, 2006–08

U.S. Geological Survey (USGS) | October 8th, 2013

The influence of groundwater on surface-water quality in the San Joaquin River, California, was examined for a 59-mile reach from the confluence with Salt Slough to Verna

The influence of groundwater on surface-water quality in the San Joaquin River, California, was examined for a 59-mile reach from the confluence with Salt Slough to Vernalis. The primary objective of this study was to quantify the rate of groundwater discharged to the lower San Joaquin River and the contribution of nitrate and dissolved organic carbon concentrations to the river. Multiple lines of evidence from four independent approaches were used to characterize groundwater contributions of nitrogen and dissolved organic carbon. Monitoring wells (in-stream and bank wells), streambed synoptic surveys (stream water and shallow groundwater), longitudinal profile surveys by boat (continuous water-quality parameters in the stream), and modeling (MODFLOW and VS2DH) provided a combination of temporal, spatial, quantitative, and qualitative evidence of groundwater contributions to the river and the associated quality. Monitoring wells in nested clusters in the streambed (in-stream wells) and on both banks (bank wells) along the river were monitored monthly from September 2006 to January 2009. Nitrate concentrations in the bank wells ranged from less than detection—that is, less than 0.01 milligrams per liter (mg/L) as nitrogen (N)—to approximately 13 mg/L as N. Nitrate was not detected at 17 of 26 monitoring wells during the study period. Dissolved organic carbon concentrations among monitoring wells were highly variable, but they generally ranged from 1 to 4 mg/L. In a previous study, 14 bank wells were sampled once in 1988 following their original installation. With few exceptions, specific conductivity and nitrate concentrations measured in this study were virtually identical to those measured 20 years ago. Streambed synoptic measurements were made by using a temporarily installed drive-point piezometer at 113 distinct transects across the stream during 4 sampling events. Nitrate concentrations exceeded the detection limit of 0.01 mg/L as N in 5 percent of groundwater samples collected from the in-stream wells as part of the synoptic surveys. Only 7 of the 113 cross-sectional transects had nitrate concentrations greater than 1 mg/L as N. In contrast, surface waters in the San Joaquin River tended to have nitrate concentrations in the 1–3 mg/L as N range. A zone of lower oxygen (less than 2 mg/L) in the streambed could limit nitrate contributions from regional groundwater flow because nitrate can be converted to nitrogen gas within this zone. Appreciable concentrations of ammonium (average concentration was 1.92 mg/L as N, and 95th percentile was 10.34 mg/L as N) in the shallow groundwater, believed to originate from anoxic mineralization of streambed sediments, could contribute nitrogen to the overlying stream as nitrate following in-stream nitrification, however. Dissolved organic carbon concentrations were highly variable in the shallow groundwater below the river (1 to 6 ft below streambed) and generally ranged between 1 and 5 mg/L, but had maximum concentrations in the 15–25 mg/L range. The longitudinal profile surveys were not particularly useful in identifying groundwater discharge areas. However, the longitudinal approach described in this report was useful as a baseline survey of measured water-quality parameters and for identifying tributary inflows that affect surface-water concentrations of nitrate. Results of the calibrated MODFLOW model indicated that the simulated groundwater discharge rate was approximately 1.0 cubic foot per second per mile (cfs/mi), and the predominant horizontal groundwater flow direction between the deep bank wells was westward beneath the river. The modeled (VS2DH) flux values (river gain versus river loss) were calculated for the irrigation and non-irrigation season, and these fluxes were an order of magnitude less than those from MODFLOW. During the irrigation season, the average river gain was 0.11 cfs/mi, and the average river loss was ?0.05 cfs/mi. During the non-irrigation season, the average river gain was 0.10 cfs/mi, and the average river loss was 0.08 cfs/mi.

Groundwater Dependent Ecosystems under the Sustainable Groundwater Management Act

Nature Conservancy | February 1st, 2018

The Sustainable Groundwater Management Act (SGMA) of 2014 is landmark legislation in California that empowers local agencies, known as groundwater sustainability agencies

The Sustainable Groundwater Management Act (SGMA) of 2014 is landmark legislation in California that empowers local agencies, known as groundwater sustainability agencies (GSAs), to sustainably manage groundwater resources for current and future social, economic, and environmental benefits. In addition to balancing these multiple benefits, SGMA includes specific requirements to identify and consider impacts to groundwater dependent ecosystems (GDEs). Recognizing data and resource limitations, The Nature Conservancy developed this guidance document based on best available science to help agencies, consultants, and stakeholders efficiently incorporate GDEs into groundwater sustainability plans (GSPs). The Nature Conservancy’s tools and resources are intended to reduce costs, shorten timelines, and increase benefits for both people and nature.

Groundwater depletion in California’s Central Valley accelerates during megadrought

Nature Portfolio (Springer Nature) | December 19th, 2022

Groundwater provides nearly half of irrigation water supply, and it enables resilience during drought, but in many regions of the world, it remains poorly, if at all mana

Groundwater provides nearly half of irrigation water supply, and it enables resilience during drought, but in many regions of the world, it remains poorly, if at all managed. In heavily agricultural regions like California’s Central Valley, where groundwater management is being slowly implemented over a 27-year period that began in 2015, groundwater provides two–thirds or more of irrigation water during drought, which has led to falling water tables, drying wells, subsiding land, and its long-term disappearance. Here we use nearly two decades of observations from NASA’s GRACE satellite missions and show that the rate of groundwater depletion in the Central Valley has been accelerating since 2003 (1.86 km3/yr, 1961–2021; 2.41 km3/yr, 2003–2021; 8.58 km3/yr, 2019–2021), a period of megadrought in southwestern North America. Results suggest the need for expedited implementation of groundwater management in the Central Valley to ensure its availability during the increasingly intense droughts of the future.

Groundwater Exchange Pools and Urban Water Supply Sustainability: Modeling Directed and Undirected Networks

American Society of Civil Engineers (ASCE) | August 1st, 2018

Groundwater basins are important sources of water supply and storage for many cities. Groundwater exchange pools offer additional opportunities for utilizing these

Groundwater basins are important sources of water supply and storage for many cities. Groundwater exchange pools offer additional opportunities for utilizing these common pool resources, but their potential role in urban water management is not clear, and modeling such exchanges can be challenging. This paper presents an analysis of the potential for groundwater basin exchange pools to contribute to urban water supply sustainability. Building on an existing model of urban water management in Los Angeles, the analysis assesses the potential for groundwater exchange pools to reduce scarcity and demonstrates a method for modeling two-way (undirected) flows within a directed-network model using linear programming. Results indicate that exchange pools can help alleviate shortages from operational changes (reduced imported water) in Los Angeles, but providing more parties with access to storage improves their effectiveness. Exchange pools could potentially provide 6–12% of total supplies and reduce shortages as much as 86%. Considerations for organizing exchange pools are discussed to explore policy implications for managing common pool resources. The analytical method for embedding undirected network flows within a larger directed-network model has wide applicability for water resource systems analysis applications, including modeling water markets and interbasin transfers. * U.C. Davis hosts a discussion of the content by the authors at California Water Blog. 

Groundwater Flow Model of the East and South Las Posas Sub-Basins – Preliminary Draft Report

Calleguas Municipal Water District (CMWD) | January 17th, 2018

INTERA Incorporated (INTERA) was retained by the Calleguas Municipal Water District (CMWD) to develop a numerical groundwater model of the East Las Posas Management Area

INTERA Incorporated (INTERA) was retained by the Calleguas Municipal Water District (CMWD) to develop a numerical groundwater model of the East Las Posas Management Area (ELPMA), which includes the locally-recognized east and south sub-basins of the Las Posas Valley Basin (LPVB). Groundwater in the ELPMA is found in a multiple-aquifer system characterized by intense faulting and folding, which is known to exert structural controls on groundwater flow and movement. The ELPMA is known to receive recharge from surface water flows in Arroyo Las Posas/Simi that runs east to west along the southern edge of the basin. Flows in the Arroyo have become perennial as a result of discharges from wastewater treatment plants and dewatering wells within and upstream of the ELPMA. Hence, understanding and modeling the surface-water/groundwater interaction along the Arroyo is an important component of the numerical model development. CMWD also owns and operates the Las Posas Basin Aquifer Storage and Recovery (ASR) Project, consisting of eighteen high capacity ASR wells and associated facilities located in the ELPMA that are used to inject and recover potable water purchased from Metropolitan Water District of Southern California (Metropolitan). Basin response to injection/extractions at the ASR well fields and the evaluation of storage capacity of the ASR well field are key considerations for this modeling project. 

Groundwater Management and Safe Drinking Water in the San Joaquin Valley

Water Foundation | June 2nd, 2020

Groundwater Monitoring Protocols for Seawater Intrusion: Example of Challenges and Experiences in a Coastal Groundwater Basin

Groundwater Resources Association of California (GRA) | October 2nd, 2017

“Seawater intrusion refers to the advancement of seawater into a groundwater supply that results in degradation of water quality in the basin, and includes seawater fro

“Seawater intrusion refers to the advancement of seawater into a groundwater supply that results in degradation of water quality in the basin, and includes seawater from any source.” –GSP Emergency Regulations (Preface to a presentation by Kathleen Kuepper of the United Water Conservation District to the 26th annual meeting of the Groundwater Resources Association of California)