Delta Smelt: Life History and Decline of a Once-Abundant Species in the San Francisco Estuary

University of California, Davis (UC Davis) | July 1st, 2016

The delta smelt is endemic to the upper San Francisco Estuary. Much of its historic habitat is no longer available and remaining habitat is increasingly unable to sustain

The delta smelt is endemic to the upper San Francisco Estuary. Much of its historic habitat is no longer available and remaining habitat is increasingly unable to sustain the population. As a listed species living in the central node of California’s water supply system, delta smelt has been the focus of a large research effort to understand causes of decline and identify ways to recover the species. Since 2008, a remarkable record of innovative research on delta smelt has been achieved, which is summarized here. Unfortunately, research has not prevented the smelt’s continued decline, which is the result of multiple, interacting factors. A major driver of decline is change to the Delta ecosystem from water exports, resulting in reduced outflows and high levels of entrainment in the large pumps of the South Delta. Invasions of alien species, encouraged by environmental change, have also played a contributing role in the decline. Severe drought effects have pushed delta smelt to record low levels in 2014–2015 and diverse and substantial management actions are needed to preserve delta smelt.

Delta Stewardship Council 2024 Annual Report

Delta Stewardship Council (Delta Council) | February 3rd, 2025

California relies on the Sacramento-San Joaquin Delta as a hub for water, biodiversity, agriculture, infrastructure, transportation, recreation, and more. Since 2010, the

California relies on the Sacramento-San Joaquin Delta as a hub for water, biodiversity, agriculture, infrastructure, transportation, recreation, and more. Since 2010, the Delta Stewardship Council has worked to advance California’s coequal goals for the Delta – a reliable statewide water supply and a resilient ecosystem – in a manner that protects and enhances the Delta’s unique character and values. In 2024, we reflected on how our agency has grown to continue facilitating collaboration with our partners.

Delta Subsidence in California: The sinking heart of the state

U.S. Geological Survey (USGS) | April 8th, 2000

The Sacramento-San Joaquin River Delta of California once was a great tidal freshwater marsh blanketed by peat and peaty alluvium. Beginning in the late 1800s, levees wer

The Sacramento-San Joaquin River Delta of California once was a great tidal freshwater marsh blanketed by peat and peaty alluvium. Beginning in the late 1800s, levees were built along the stream channels, and the land thus protected from flooding was drained, cleared, and planted. Although the Delta is now an exceptionally rich agricultural area (over a $500 million crop value in 1993), its unique value is as a source of freshwater for the rest of the State. It is the heart of a massive north-to-south water delivery system. Much of this water is pumped southward for use in the San Joaquin Valley and elsewhere in central and southern California. The leveed tracts and islands help to protect water-export facilities in the southern Delta from saltwater intrusion by displacing water and maintaining favorable freshwater gradients. However, ongoing subsidence behind the levees reduces levee stability and, thus, threatens to degrade water quality in the massive north-to-south water-transfer system.

Delta Vision Strategic Plan

State of California | October 17th, 2008

When it was created by Governor Schwarzenegger’s Executive Order S-17-06 in 2006, the charge of the Delta Vision Blue Ribbon Task Force (Task Force) was nothing less th

When it was created by Governor Schwarzenegger’s Executive Order S-17-06 in 2006, the charge of the Delta Vision Blue Ribbon Task Force (Task Force) was nothing less than to create a vision to repair the ecological damage to the Sacramento-San Joaquin River Delta (Delta), and then prepare a strategic plan which would sustain the Delta in future decades while ensuring a reliable water supply for the two-thirds of California’s population who depend in whole or in part on water from the Delta.

Delta Vision Strategic Plan -- from Phil Isenberg, 1939-2023

State of California | October 17th, 2008

When it was created by Governor Schwarzenegger’s Executive Order S-17-06 in 2006, the charge of the Delta Vision Blue Ribbon Task Force (Task Force) was nothing less th

When it was created by Governor Schwarzenegger’s Executive Order S-17-06 in 2006, the charge of the Delta Vision Blue Ribbon Task Force (Task Force) was nothing less than to create a vision to repair the ecological damage to the Sacramento-San Joaquin River Delta (Delta), and then prepare a strategic plan which would sustain the Delta in future decades while ensuring a reliable water supply for the two-thirds of California’s population who depend in whole or in part on water from the Delta.

Delta Water Facilities Peripheral Canal Preliminary Design Report (Draft Copy)

California Department of Water Resources (DWR) | July 31st, 1973

Delta-Estuary California's Inland Coast A Public Trust Report

California State Lands Commission (SLC) | May 1st, 1991

Delta-Mendota Canal Recirculation Feasibility Study Plan Formulation Report

U.S. Bureau of Reclamation (USBR) | September 30th, 2010

The U.S. Department of the Interior, Bureau of Reclamation (Reclamation) is evaluating the feasibility of using recirculation strategies to improve water quality and flow

The U.S. Department of the Interior, Bureau of Reclamation (Reclamation) is evaluating the feasibility of using recirculation strategies to improve water quality and flow in the lower San Joaquin River (SJR). Specifically, Reclamation is evaluating the feasibility of the Delta-Mendota Canal (DMC) Recirculation Project (Project) in which water from the Sacramento–San Joaquin River Delta (Delta) would be recirculated through the Central Valley Project (CVP) pumping and conveyance facilities to the SJR upstream from Vernalis. The DMC, which is part of the CVP, would be the primary conveyance facility utilized. The DMC is 120-mile canal that begins at the C.W. “Bill” Jones Pumping Plant (Jones) and ends at Mendota Pool, near the town of Mendota. Jones pumps water from the Delta into the canal. Water would be released from the canal into either Newman Wasteway or Westley Wasteway and would flow back into SJR near its confluence with the Merced River (Newman Wasteway) or with the Tuolumne River (Westley Wasteway). The water would re-enter the Delta near the town of Vernalis. In 2004, Reclamation initiated the DMC Recirculation Project Feasibility Study (Study). The Study is authorized by the CALFED (California Federal Bay-Delta Program) Bay-Delta Authorization Act of 2004 (118 Stat. §§ 1681-1702.; Public Law 108-361) and a similar study is required by the State Water Resources Control Board (SWRCB) as part of Water Right Decision 1641 (D-1641). The purposes of the PFR are (1) to provide information on the existing and potential resources that may be affected by the Project and (2) to present the results of the evaluation of the alternative plans that were carried forward from the 2008 Initial Alternatives Information Report (IAIR). The alternative plans are compared and ranked and the next steps in the study are presented.

Demonstration of a Watershed Approach to Wetland Restoration Planning for Load Reductions: A Pilot Demonstration Project Using GreenPlan-IT in the Santa Rosa Plain, Sonoma County, California

San Francisco Estuary Institute (SFEI) | December 30th, 2017

This summary memorandum presents technical recommendations to the 401 Certification and Waste Discharge Program (401 Program) of the State Water Resources Control Board (

This summary memorandum presents technical recommendations to the 401 Certification and Waste Discharge Program (401 Program) of the State Water Resources Control Board (State Board) for a coherent, scientifically sound, repeatable, watershed approach to wetland restoration site evaluation, compliance monitoring and assessment, and Tracking. The recommendations are drawn from the previous four memoranda produced for the Pilot Demonstration Project (Project) that address the following subjects: project work plan and information flow diagram; scientific literature review; landscape scenario planning (to map and prioritize restoration opportunities); and a framework for a watershed-approach to evaluate and report the capacity of a wetland restoration site to protect wetland beneficial uses. This Project focused on a sub-watershed of the Santa Rosa Plain, in Sonoma County, California. The area was chosen for the Project for three reasons: (1) it is integral to an existing nutrient TMDL and therefore is supported relatively well with hydrological and nutrient data; (2) the historical and existing wetlands and streams of the area were mapped recently in sufficient detail to inform landscape planning; and (3) implementation of the TMDL will involve wetland restoration to reduce downstream nutrient loads, and therefore the Project may help implement the TMDL. The primary overall purpose of this Project was to explore how numerical simulation and statistical modeling could be combined with existing wetland assessment and reporting tools to create a coherent, watershed-based approach to wetland beneficial use protection. Any relevance to the existing nutrient TMDL for the demonstration area is an intentional, but secondary benefit of this Project. Contents: Wetland Beneficial Use Protection: Pilot Demonstration Project A Synthesis of Literature on Wetland Assimilation Capacities, Models, and Pollutant Loads Simulating Wetland Assimilation Capacity in the Lower Santa Rosa Creek Watershed Pilot Demonstration Area Using the HSPF Model Demonstration of a Watershed Approach To Wetland Restoration Planning Using GreenPlan-IT

Demystifying the Delta

CALFED | August 1st, 2004