Report of Waste Discharge and Technical Report

Westlands Water District | July 10th, 2019

This Technical Report is in support of a Report of Waste Discharge (ROWD) for an agricultural aquifer storage and recovery (Ag-ASR) program for Westlands Water District

This Technical Report is in support of a Report of Waste Discharge (ROWD) for an agricultural aquifer storage and recovery (Ag-ASR) program for Westlands Water District (Westlands or District). The District is located in western Fresno and Kings Counties in the San Joaquin Valley. With the new Sustainable Groundwater Management Act (SGMA) signed into law in 2014, Westlands is pursuing means to recharge groundwater within the District’s boundaries, which coincide with the Westside Subbasin (Groundwater Subbasin Number 5-22.09). Due to the presence of poor quality shallow groundwater, fine-grained soils, and the Corcoran Clay restrictive layer, surface recharge opportunities are limited (Schmidt, 2009). Direct injection using Ag-ASR wells holds promise as a more widely implementable recharge method in the District.

Report on Salton Sea Projects

California Natural Resources Agency (CNRA) | April 8th, 2016

Formed in 1905 when Colorado River flood waters breached an irrigation diversion structure and caused the river to temporarily flow into the then-dry Salton Sink, today�

Formed in 1905 when Colorado River flood waters breached an irrigation diversion structure and caused the river to temporarily flow into the then-dry Salton Sink, today’s Salton Sea is only the latest in a long succession of waterbodies to occupy the area. At 350 square miles, California’s largest lake is hydrologically connected to the Colorado River system and has been largely maintained since the 1905 event by irrigation water from agricultural production in the Imperial Valley. The historic Quantification Settlement Agreement (2003) provided California the means to implement water transfers and supply programs that allowed the state to live within its 4.4 million acre-foot basic annual apportionment of Colorado River water. Though long plagued by problems associated with its terminality—and resultant accumulation of salts, nutrients, and other impurities—the water transfers contained in the QSA meant a hastening of its ecological decline. Mitigation waters were provided for the Sea in the agreement, but are set to expire in 2017.  In response to growing concern about the impending and current deterioration of conditions at the Salton Sea, California Governor Edmund G. Brown Jr. in May 2015 created the Salton Sea Task Force to rapidly evaluate and take action to bring certainty to the Sea’s future and develop a series of findings that would guide further action at the lake. To coordinate and facilitate the actions the Governor also created the position of Assistant Secretary for Salton Sea Policy within the California Natural Resources Agency (CNRA).  The Salton Sea Task Force issued their findings in November 2015, which called for the development of a Salton Sea Management Program that covered three major elements: sustainable habitat; air quality and potential private sector energy development. The Task Force also acknowledged that a successful program depends on the following three principles: 1) strong state, federal, and local partnerships; 2) clear and achievable milestones with state directed plans to achieve them; and 3) committed participation from all stakeholders who share the goals of protecting air quality, reducing habitat impacts, and maintaining a secure Colorado River Water Supply. Task Force findings also contained a series of actions for implementation by the California Natural Resources Agency (CNRA) that included the development of a Salton Sea Management Plan with short and midterm goals for habitat and dust suppression projects, an improved public awareness and local partnerships program and an accelerated implementation of planning, permitting and construction. 

Resilient Landscape Vision for the Calabazas Creek, San Tomas Aquino Creek, and Pond A8 Area: Bayland-Creek Reconnection Opportunities

San Francisco Estuary Institute (SFEI) | May 1st, 2018

This report proposes a multi-faceted redesign of the South San Francisco Bay shoreline at the interface with Calabazas and San Tomas Aquino creeks. Recognizing the opport

This report proposes a multi-faceted redesign of the South San Francisco Bay shoreline at the interface with Calabazas and San Tomas Aquino creeks. Recognizing the opportunities presented by changing land use and new challenges, such as accelerated sea-level rise, we explore in this report a reconfigured shoreline that could improve ecosystem health and resilience, reduce maintenance costs, and protect surrounding infrastructure. 

Resistivity imaging reveals complex pattern of saltwater intrusion along Monterey coast

Journal of Hydrology (Elsevier) | February 22nd, 2017

A coastal region represents a dynamic zone where fresh groundwater in the coastal aquifers interacts with saline ocean water. The location of the freshwater-saltwater int

A coastal region represents a dynamic zone where fresh groundwater in the coastal aquifers interacts with saline ocean water. The location of the freshwater-saltwater interface is governed by the density and pressure differences on the two sides of the interface and the subsurface hydrologic properties that control fluid movement. Saltwater intrusion is the process in which this interface moves landward, with saltwater then occupying parts of the aquifer that were once fresh. While this process has been observed and documented throughout the world for over a century (Bear et al., 1999), climate change, growing water demands, and manipulation of natural hydrologic systems have led to saltwater intrusion being considered a significant threat to future freshwater resources globally (Kinzelbach et al., 2003; Barlow and Reichard, 2009; Werner et al., 2013). Saltwater intrusion can have a number of significant economic and environmental impacts, including diminished freshwater storage capacity, contamination of freshwater production wells, soil salinization, and decreased nutrient laden freshwater discharge to marine ecosystems (Johannes, 1980; Taniguchi et al., 2002; Werner et al., 2013). A number of steps can be taken to attempt to slow the rate of saltwater intrusion, including spatial and temporal changes in the extent of groundwater pumping, in landuse, in surface water diversions, and in artificial recharge (Abarca et al., 2006). What is needed however is a way to prioritize these actions, or combinations of actions, so as to optimize the impact on saltwater intrusion. This requires an accurate understanding of the current distribution of freshwater and saltwater, that can be used to predict future locations in response to these, and other, actions (Sanford and Pope, 2009). Saltwater intrusion is traditionally mapped and monitored using measurements made in wells and predictive flow models (Werner et al., 2013). There are a number of limitations with these methods. Measurements made in wells provide point data, which may fail to capture the spatial complexity in subsurface conditions. Improving spatial coverage with additional wells can be cost prohibitive (Ogilvy et al., 2009). Additionally, salinity measurements from wells can be flux-averaged concentrations, and head measurements in wells are affected by the density of the water column so can be misinterpreted in the presence of unknown salt water, and are susceptible to measurement, instrument, and time lag errors (Carrera et al., 2009; Post and Von Asmuth, 2013). Models are generally calibrated by matching historic head values in wells and/or matching salinity values from well samples (Carrera et al., 2009), thus all the limitations of well data are carried over into the model calibration. Given these limitations there is significant opportunity for additional methods of mapping and monitoring the distribution of saltwater in the subsurface for improved management of coastal aquifers.

Response in the water quality of the Salton Sea, California, to changes in phosphorus loading: an empirical modeling approach

Hydrobiologia (Springer) | January 10th, 2008

Salton Sea, California, like many other lakes, has become eutrophic because of excessive nutrient loading, primarily phosphorus (P). A Total Maximum Daily Load (TMDL)

Salton Sea, California, like many other lakes, has become eutrophic because of excessive nutrient loading, primarily phosphorus (P). A Total Maximum Daily Load (TMDL) is being prepared for P to reduce the input of P to the Sea. In order to better understand how P-load reductions should affect the average annual water quality of this terminal saline lake, three different eutrophication programs (BATHTUB, WiLMS, and the Seepage Lake Model) were applied. After verifying that specific empirical models within these programs were applicable to this saline lake, each model was calibrated using water quality and nutrient-loading data for 1999 and then used to simulate the effects of specific P-load reductions. Model simulations indicate that a 50% decrease in external P loading would decrease near-surface total phosphorus concentrations (TP) by 25– 50%. Application of other empirical models demonstrated that this decrease in loading should decrease near-surface chlorophyll a concentrations (Chl a) by 17–63% and increase Secchi depths (SD) by 38–97%. The wide range in estimated responses in Chl a and SD were primarily caused by uncertainty in how non-algal turbidity would respond to P-load reductions. If only the models most applicable to the Salton Sea are considered, a 70–90% P-load reduction is required for the Sea to be classified as moderately eutrophic (trophic state index of 55). These models simulate steady-state conditions in the Sea; therefore, it is difficult to ascertain how long it would take for the simulated changes to occur after load reductions.

Response to the Delta Science Program and Independent Review Panel Report from the 2015 Annual Review of the Long-term Operation Biological Opinions (2015 Annual Review) (January 29, 2016)

Delta Stewardship Council (Delta Council) | January 29th, 2016

Responses of drinking water bulk and biofilm microbiota to elevated water age in bench-scale simulated distribution systems

Biofilms and Microbiomes (Nature) | January 22nd, 2024

Restoration pulse flows from a California dam temporarily increase drifting invertebrate biomass concentration

Journal of Environmental Management (Elsevier) | November 9th, 2022

The decline of Pacific salmon (Oncorhynchus spp.) populations over the last few decades has stimulated major restoration efforts across the Pacific Northwest to improve t

The decline of Pacific salmon (Oncorhynchus spp.) populations over the last few decades has stimulated major restoration efforts across the Pacific Northwest to improve the status of these iconic fishes. The leading factors contributing to the decline of Pacific salmon include watershed degradation and water diversions, which result in part from widespread dam construction across the United States (Moyle, 1994). Early river restoration actions primarily focused on physical habitat alterations (e.g., in-stream habitat improvement, fish passage; Barinaga, 1996; Bernhardt et al., 2005), while more recent work has centered around restoring natural processes (Johnson et al., 2019). Since socioeconomic and political complications are typically too great for dam removal projects to be feasible, reconciliation ecology, which encourages the accommodation of both human and wildlife needs in a human-dominated landscape, can be a more effective approach to restoration (Rosenzweig, 2003; Moyle et al., 2017). Rather than the elusive goal of returning rivers to a natural flow regime, the aim can be to attain functional environmental flows to support beneficial flow-ecology relationships (Poff et al., 2017). Dams can be operated to reduce some of their detrimental effects by releasing flows that improve downstream habitat through the preservation of key hydrologic signals upon which biophysical processes and native biological communities depend (Yarnell et al., 2020). Four functional flow components were identified for Mediterranean montane streams: wet-season initiation flows, peak magnitude flows, spring recession flows, and dry-season low flows; see Yarnell et al. (2015) for a description about the importance of each key functional component. Several studies have identified the need to further assess linkages between streamflow, invertebrate prey availability, and drift-foraging dynamics for consideration in future restoration plans for juvenile salmonids (Weber et al., 2014; Naman et al., 2016; Lusardi et al., 2018). The focus of this study is to assess the impact of dam-release flows imitating one of those functional flow components, peak magnitude flows, on invertebrate drift as a food resource for juvenile salmonids.

Restoration Vision for the Laguna de Santa Rosa

San Francisco Estuary Institute (SFEI) | April 1st, 2020

The Laguna de Santa Rosa, located in the Russian River watershed in Sonoma County, CA, is an expansive freshwater wetland complex that hosts a rich diversity of plant a

The Laguna de Santa Rosa, located in the Russian River watershed in Sonoma County, CA, is an expansive freshwater wetland complex that hosts a rich diversity of plant and wildlife species, many of which are federally or state listed as threatened, endangered, or species of special concern. The Laguna is also home to a thriving agricultural community that depends on the land for its livelihood. Since the mid-19th century, development within the Laguna and its surrounding watershed have had a considerable impact on the landscape, affecting both wildlife and people. Compared to predevelopment conditions, the Laguna currently experiences increased stormwater runoff and flooding, increased delivery and accumulation of fine sediment and nutrients, spread of problematic invasive species, and decreased habitat for native fish and wildlife species. Predicted changes in future precipitation patterns and summertime air temperatures, combined with expanding development pressure, could exacerbate these problems. People who manage land and regulate land management decisions in and around the Laguna, including landowners; federal, state, and local agencies; and local stakeholders, are seeking a long-term management approach for the Laguna that improves conditions for the wildlife and people that call the Laguna home. The California Department of Fish and Wildlife and Sonoma Water funded the Laguna-Mark West Creek Watershed Master Restoration Planning Project to develop such a management approach, focusing on the need to identify restoration and management actions that enhance desired ecological functions of the Laguna, while also supporting the area’s agriculture and its local residents.

Restoring the Heart of a Healthy Estuary: A Review of Restoration in the Sacramento–San Joaquin Delta and Suisun Marsh

Publisher not available | December 19th, 2025

The restoration of native species-dominated ecosystems is critical for improving ecosystem health and meeting policy goals in the Sacramento–San Joaquin Delta and Suisu

The restoration of native species-dominated ecosystems is critical for improving ecosystem health and meeting policy goals in the Sacramento–San Joaquin Delta and Suisun Marsh (upper San Francisco Estuary, collectively), one of the largest estuarine systems in North America. To accomplish large-scale restoration in this heavily altered system, a variety of projects, programs, and motivations inform restoration planning and implementation. Chapter 4 of the Delta Plan synthesizes restoration goals across these efforts to produce comprehensive ecosystem restoration targets of between 60,000 and 80,000 acres across seven ecosystem types by 2050, but a comprehensive review of restoration progress and planning to date is needed. To fill this gap, this paper analyzes the current state of ecosystem restoration in the upper San Francisco Estuary in the context of the Delta Plan targets. We review current scientific and management literature and implementation approaches, and synthesize acreage totals across completed, in-progress, and planned projects for four ecosystem types where substantial development of restoration in the system has occurred: tidal wetland, non-tidal wetland, riparian, and floodplain. We find that tidal wetland restoration has progressed more rapidly than other ecosystem types, motivated by mitigation requirements related to the federal Endangered Species Act. Across all ecosystem types, we identify both promising progress and clear needs for accelerated planning and implementation of restoration projects to meet Delta Plan 2050 targets, and discuss ongoing needs related to science, funding, and implementation.