Climate-driven aerobic habitat loss in the California Current System

American Association for the Advancement of Science (AAAS) | May 15th, 2020

Climate warming is expected to intensify hypoxia in the California Current System (CCS), threatening its diverse and productive marine ecosystem. We analyzed past region

Climate warming is expected to intensify hypoxia in the California Current System (CCS), threatening its diverse and productive marine ecosystem. We analyzed past regional variability and future changes in the Metabolic Index, a species-specific measure of the environment’s capacity to meet temperature-dependent organismal oxygen demand. Across the traits of diverse animals, exhibits strong seasonal to interdecadal variations throughout the CCS, implying that resident species already experience large fluctuations in available aerobic habitat. For a key CCS species, northern anchovy, the long-term biogeographic distribution and decadal fluctuations in abundance are both highly coherent with aerobic habitat volume. Ocean warming and oxygen loss by 2100 are projected to decrease below critical levels in 30 to 50% of anchovies’ present range, including complete loss of aerobic habitat—and thus likely extirpation—from the southern CCS. Aerobic habitat loss will vary widely across the traits of CCS taxa, disrupting ecological interactions throughout the region.

Climate-Smart Tools to Protect California’s Freshwater Biodiversity

Public Policy Institute of California (PPIC) | May 28th, 2024

California’s freshwater ecosystems—and the native plants and animals that rely on them—have been in decline for decades. Roughly half of California’s native fresh

California’s freshwater ecosystems—and the native plants and animals that rely on them—have been in decline for decades. Roughly half of California’s native freshwater species are highly vulnerable to extinction within this century. But efforts to protect and recover native species now face an additional serious threat: climate change, which is accelerating and compounding the impacts of past and current land and water management issues. Simply working harder, using the same insufficient approaches to conservation, is unlikely to be successful. New approaches, including some that are experimental or highly controversial, are urgently needed. Although California has recently made important strides in setting goals for salmon, the state lacks a comprehensive approach to protecting native biodiversity in the face of climate change. We have identified a portfolio of actions that can help California rise to this urgent challenge.

Climatic regulation of the neurotoxin domoic acid

National Academy of Sciences (NAS) | January 9th, 2017

Domoic acid is a potent neurotoxin produced by certain marine microalgae that can accumulate in the foodweb, posing a health threat to human seafood consumers a

Domoic acid is a potent neurotoxin produced by certain marine microalgae that can accumulate in the foodweb, posing a health threat to human seafood consumers and wildlife in coastal regions worldwide. Evidence of climatic regulation of domoic acid in shellfish over the past 20 y in the Northern California Current regime is shown. The timing of elevated domoic acid is strongly related to warm phases of the Pacific Decadal Oscillation and the Oceanic Niño Index, an indicator of El Niño events. Ocean conditions in the northeast Pacific that are associated with warm phases of these indices, including changes in prevailing currents and advection of anomalously warm water masses onto the continental shelf, are hypothesized to contribute to increases in this toxin. We present an applied domoic acid risk assessment model for the US West Coast based on combined climatic and local variables. Evidence of regional- to basin-scale controls on domoic acid has not previously been presented. Our findings have implications in coastal zones worldwide that are affected by this toxin and are particularly relevant given the increased frequency of anomalously warm ocean conditions.

Collateral Damage: A citizen’s guide to fish kills and habitat degradation at the state and federal water project pumps in the Delta

Bay Institute | March 1st, 2012

Large-scale fish kills and habitat destruction aren’t an unusual occurrence at the giant federal and state pumps that export water from the Sacramento-San Joaquin Delta

Large-scale fish kills and habitat destruction aren’t an unusual occurrence at the giant federal and state pumps that export water from the Sacramento-San Joaquin Delta to agribusinesses and cities in the southern half of the state. These events are business as usual. • Every day, between 870 and 61,000 fish – including from 200 to 42,000 native and endangered fishes – are “salvaged” at the pumps. Most die in the process. • On average, over 9 million fish – representing the twenty fish species considered in this report – are “salvaged” each year at the pumps. As many as 15 million fish of all species encountered are “salvaged” each year. • Up to 40% of the total population of the endangered delta smelt and 15% of the endangered winter-run population of Chinook salmon are killed at the pumps in some years. In the first half of 2011, over 8.6 million splittail were salvaged. • Salvage estimates drastically underestimate the problem. The numbers do not factor in the results of “indirect” mortality, as high levels of export pumping disrupt fish migration, shrink the amount of non-lethal habitat available to fish species, and remove vast amounts of biomass, including fish eggs and larvae too small to be screened at the pumps. • Export pumping causes the lower San Joaquin River to flow backwards most of the year and removes the equivalent of 170 railroad boxcars of water – and the accompanying fish, other organisms, and nutrients – from the Delta ecosystem every minute. • Large numbers of fish being entrained is a problem even for species that are not currently listed as “endangered.” Killing large numbers of fish year after year cuts off population growth in response to favorable conditions and can start the species on a downward path to extinction. As the species declines, the population impacts of entrainment become proportionately larger. • Entrainment is a real problem. But the same interests in the Delta export community who claim that it isn’t also back constructing expensive new conveyance facilities such as a peripheral canal or tunnel to solve the problem that they say doesn’t exist.

Comments on and Protest of Temporary Urgency Change Petition Regarding Delta Water Quality

California State Water Resources Control Board (SWRCB) | February 17th, 2023

Committee for Delta Resources Improvement Working Paper Regarding the Sacramento-San Joaquin Delta/San Francisco Bay Estuary

Committee for Delta Resources Improvement | December 1st, 1986

Comparing and integrating fish surveys in the San Francisco Estuary: Why diverse long-term surveys are important

UnIversity of California, Davis (UC Davis) | June 30th, 2020

Compliance with D-1641 San Joaquin River October Flow Requirements

California State Water Resources Control Board (SWRCB) | October 9th, 2023

Conservation Strategy for Restoration of the Sacramento-San Joaquin Delta, Sacramento Valley and San Joaquin Valley Regions

CALFED | May 15th, 2014

The Conservation Strategy describes ERP goals and conservation priorities for Stage 2 of the CALFED Bay-Delta Program (CALFED) and was developed by the Department of Fish

The Conservation Strategy describes ERP goals and conservation priorities for Stage 2 of the CALFED Bay-Delta Program (CALFED) and was developed by the Department of Fish and Wildlife (CDFW) in coordination with the United States Fish and Wildlife Service (USFWS) and the National Oceanic and Atmospheric Administration Fisheries Service (NOAA Fisheries), collectively known as the ERP Implementing Agencies. This document serves as the conceptual framework that will guide future ERP environmental restoration, including development of conservation priorities and processes to identify and implement restoration opportunities, and monitoring to guide and improve its success in the Sacramento-San Joaquin Delta (Delta), and the Sacramento Valley and the San Joaquin Valley regions. This Conservation Strategy builds on information presented in the Ecosystem Restoration Program Plan (ERPP) (CALFED 2000a), the Multi-species Conservation Strategy (MSCS) (CALFED 2000d), ERP Milestones Reports (CALFED 2001b) and Annual Reports (DFG 2011b), the best available science on current ecological conditions, related programs and planning efforts, and input from stakeholders and the general public. There are many different kinds of conservation planning currently underway for the Delta, Sacramento and San Joaquin Valley regions and restoration is very much a shared vision between and among the agencies, various resource users, and the public. ERP Implementing Agencies will be using this ERP Stage 2 Conservation Strategy as a guide through the end of Stage 2 (2030). It provides a comprehensive ecosystem restoration strategy for ERP efforts in the Focus Area (Focus Area) (Figure 1), allowing flexibility in adapting responses accordingly to new scientific findings, changed circumstances and new or modified future conservation priorities. This Conservation Strategy will serve as a guide to identify programmatic-level types and locations of potential restoration actions based on conservation priorities. It is not a prescription for restoration actions at any specific site. Within this strategy is a compilation of conservation priorities, articulated from lessons learned during Stage 1, which may be used to meet ERP goals. All agencies, groups, or individuals interested in resource conservation and management within the Focus Area are encouraged to use this document as a guide to help coordinate activities to address ERP conservation priorities.

Contaminant Concentrations in San Francisco Bay Sportfish, Cruise Report Regional Monitoring Program (RMP) 2019

San Francisco Estuary Institute (SFEI) | July 1st, 2019

This report contains information on the spring and summer field sampling efforts conducted by the Marine Pollution Studies Laboratory at Moss Landing Marine Labs (MPSL-ML

This report contains information on the spring and summer field sampling efforts conducted by the Marine Pollution Studies Laboratory at Moss Landing Marine Labs (MPSL-MLML). The purpose of this field effort was to collect sportfish for an eighth season of data (in support of 1994, 1997, 2000, 2003, 2006, 2009, and 2014 surveys) in the ongoing study of Contamination in San Francisco Bay Sportfish. The work was contracted through the San Francisco Estuary Institute (SFEI) for the Regional Monitoring Program (RMP) for Water Quality.  The Regional Monitoring Program for Water Quality in San Francisco Bay (RMP) monitors concentrations of contaminants in fish tissue as indicators of bioaccumulation of contaminants in the Bay. In 2019, the RMP will conduct its eighth round of sport fish monitoring by collecting sport fish samples from various locations in the Bay as a part of routine Status and Trends Monitoring. Add-ons to the routine Status and Trends sport fish monitoring design will include archiving for microplastics and fipronil, as well as additional collections of shiner surfperch in Priority Margin Unit areas (PMUs).