Report to the California State Legislature Joint Legislative Budget Committee on Reduction of Agricultural Pollution Runoff into the Sacramento-San Joaquin Delta

California State Water Resources Control Board (SWRCB) | December 1st, 2010

This report has been prepared pursuant to the requirements of the Supplemental Report to the 2008 Budget Act: “On or before March 30, 2009, State Water Resources Con

This report has been prepared pursuant to the requirements of the Supplemental Report to the 2008 Budget Act: “On or before March 30, 2009, State Water Resources Control Board (State Water Board) shall submit a report to the Joint Legislative Budget Committee and to the relevant policy committees that details: (a) the precise actions the State Water Board would have to undertake to obtain a 30 percent reduction to agricultural pollution runoff in to the Sacramento-San Joaquin Delta [Delta] and its tributary watersheds by 2012, (b) the estimated costs of those actions, and (c) which of those actions can be completed administratively and which would require legislation to implement.” The Central Valley Regional Water Quality Control Board, (Central Valley Regional Water Board) staff has determined that replacing irrigation practices that produce return flow is the only method of ensuring a 30 percent reduction in agricultural pollution runoff to the Delta by 2012. The program would be focused within the Delta and San Joaquin River watershed and apply to surface return flow (tailwater). Tailwater can convey contaminants applied to or on the land surface, such as pesticides, sediment, fertilizer, and manure. Tile water (subsurface drainage pumped to surface waters) contains naturally occurring minerals found in ground water, and may contain contaminants leached into the ground water due to application on the land surface. However, tile water is not the focus of this control strategy, since it would take longer to implement the required control technologies. Irrigation return flow is the focus of this effort, since it is more amenable to control (versus storm water runoff) and over 60 percent of the exceedances of water quality objectives we have identified occur during the irrigation season.1 A target of converting 50 percent of the irrigated acres that produce runoff to more efficient irrigation practices that produce no runoff is recommended. A 50 percent conversion target is recommended, since there are other pathways for agricultural pollutants to reach the Delta through surface waters (e.g., pesticide drift, tile water drainage), so a larger percentage reduction in irrigation runoff would be needed to ensure that the overall 30 percent pollution reduction goal is achieved. The estimated cost to the agricultural community to implement the required management practices is $250 million - $450 million in capital cost, assuming half of the one million acres of agricultural land requiring improved irrigation management systems would be targeted to meet the 2012 timeframe. Additional Central Valley Regional Water Board staff resources of up to 10 PY would be required to ensure the required practices are implemented.

Resilient Landscape Vision for the Calabazas Creek, San Tomas Aquino Creek, and Pond A8 Area: Bayland-Creek Reconnection Opportunities

San Francisco Estuary Institute (SFEI) | May 1st, 2018

This report proposes a multi-faceted redesign of the South San Francisco Bay shoreline at the interface with Calabazas and San Tomas Aquino creeks. Recognizing the opport

This report proposes a multi-faceted redesign of the South San Francisco Bay shoreline at the interface with Calabazas and San Tomas Aquino creeks. Recognizing the opportunities presented by changing land use and new challenges, such as accelerated sea-level rise, we explore in this report a reconfigured shoreline that could improve ecosystem health and resilience, reduce maintenance costs, and protect surrounding infrastructure. 

Resilient Landscape Vision for Upper Penitencia Creek

San Francisco Estuary Institute (SFEI) | January 1st, 2019

This report proposes a new multi-benefit approach to flood management along Upper Penitencia Creek. Recognizing the creek’s complex history, land use, and challenges, t

This report proposes a new multi-benefit approach to flood management along Upper Penitencia Creek. Recognizing the creek’s complex history, land use, and challenges, this report explores a suite of actions that could help meet flood management objectives while improving ecosystem functioning, expanding recreational opportunities, and supporting water supply needs. 

Response in the water quality of the Salton Sea, California, to changes in phosphorus loading: an empirical modeling approach

Hydrobiologia (Springer) | January 10th, 2008

Salton Sea, California, like many other lakes, has become eutrophic because of excessive nutrient loading, primarily phosphorus (P). A Total Maximum Daily Load (TMDL)

Salton Sea, California, like many other lakes, has become eutrophic because of excessive nutrient loading, primarily phosphorus (P). A Total Maximum Daily Load (TMDL) is being prepared for P to reduce the input of P to the Sea. In order to better understand how P-load reductions should affect the average annual water quality of this terminal saline lake, three different eutrophication programs (BATHTUB, WiLMS, and the Seepage Lake Model) were applied. After verifying that specific empirical models within these programs were applicable to this saline lake, each model was calibrated using water quality and nutrient-loading data for 1999 and then used to simulate the effects of specific P-load reductions. Model simulations indicate that a 50% decrease in external P loading would decrease near-surface total phosphorus concentrations (TP) by 25– 50%. Application of other empirical models demonstrated that this decrease in loading should decrease near-surface chlorophyll a concentrations (Chl a) by 17–63% and increase Secchi depths (SD) by 38–97%. The wide range in estimated responses in Chl a and SD were primarily caused by uncertainty in how non-algal turbidity would respond to P-load reductions. If only the models most applicable to the Salton Sea are considered, a 70–90% P-load reduction is required for the Sea to be classified as moderately eutrophic (trophic state index of 55). These models simulate steady-state conditions in the Sea; therefore, it is difficult to ascertain how long it would take for the simulated changes to occur after load reductions.

Response to the Delta Science Program and Independent Review Panel Report from the 2015 Annual Review of the Long-term Operation Biological Opinions (2015 Annual Review) (January 29, 2016)

Delta Stewardship Council (Delta Council) | January 29th, 2016

Responses of drinking water bulk and biofilm microbiota to elevated water age in bench-scale simulated distribution systems

Biofilms and Microbiomes (Nature) | January 22nd, 2024

Restoration pulse flows from a California dam temporarily increase drifting invertebrate biomass concentration

Journal of Environmental Management (Elsevier) | November 9th, 2022

The decline of Pacific salmon (Oncorhynchus spp.) populations over the last few decades has stimulated major restoration efforts across the Pacific Northwest to improve t

The decline of Pacific salmon (Oncorhynchus spp.) populations over the last few decades has stimulated major restoration efforts across the Pacific Northwest to improve the status of these iconic fishes. The leading factors contributing to the decline of Pacific salmon include watershed degradation and water diversions, which result in part from widespread dam construction across the United States (Moyle, 1994). Early river restoration actions primarily focused on physical habitat alterations (e.g., in-stream habitat improvement, fish passage; Barinaga, 1996; Bernhardt et al., 2005), while more recent work has centered around restoring natural processes (Johnson et al., 2019). Since socioeconomic and political complications are typically too great for dam removal projects to be feasible, reconciliation ecology, which encourages the accommodation of both human and wildlife needs in a human-dominated landscape, can be a more effective approach to restoration (Rosenzweig, 2003; Moyle et al., 2017). Rather than the elusive goal of returning rivers to a natural flow regime, the aim can be to attain functional environmental flows to support beneficial flow-ecology relationships (Poff et al., 2017). Dams can be operated to reduce some of their detrimental effects by releasing flows that improve downstream habitat through the preservation of key hydrologic signals upon which biophysical processes and native biological communities depend (Yarnell et al., 2020). Four functional flow components were identified for Mediterranean montane streams: wet-season initiation flows, peak magnitude flows, spring recession flows, and dry-season low flows; see Yarnell et al. (2015) for a description about the importance of each key functional component. Several studies have identified the need to further assess linkages between streamflow, invertebrate prey availability, and drift-foraging dynamics for consideration in future restoration plans for juvenile salmonids (Weber et al., 2014; Naman et al., 2016; Lusardi et al., 2018). The focus of this study is to assess the impact of dam-release flows imitating one of those functional flow components, peak magnitude flows, on invertebrate drift as a food resource for juvenile salmonids.

Restoration Vision for the Laguna de Santa Rosa

San Francisco Estuary Institute (SFEI) | April 1st, 2020

The Laguna de Santa Rosa, located in the Russian River watershed in Sonoma County, CA, is an expansive freshwater wetland complex that hosts a rich diversity of plant a

The Laguna de Santa Rosa, located in the Russian River watershed in Sonoma County, CA, is an expansive freshwater wetland complex that hosts a rich diversity of plant and wildlife species, many of which are federally or state listed as threatened, endangered, or species of special concern. The Laguna is also home to a thriving agricultural community that depends on the land for its livelihood. Since the mid-19th century, development within the Laguna and its surrounding watershed have had a considerable impact on the landscape, affecting both wildlife and people. Compared to predevelopment conditions, the Laguna currently experiences increased stormwater runoff and flooding, increased delivery and accumulation of fine sediment and nutrients, spread of problematic invasive species, and decreased habitat for native fish and wildlife species. Predicted changes in future precipitation patterns and summertime air temperatures, combined with expanding development pressure, could exacerbate these problems. People who manage land and regulate land management decisions in and around the Laguna, including landowners; federal, state, and local agencies; and local stakeholders, are seeking a long-term management approach for the Laguna that improves conditions for the wildlife and people that call the Laguna home. The California Department of Fish and Wildlife and Sonoma Water funded the Laguna-Mark West Creek Watershed Master Restoration Planning Project to develop such a management approach, focusing on the need to identify restoration and management actions that enhance desired ecological functions of the Laguna, while also supporting the area’s agriculture and its local residents.

Retiring Poisoned Lands in the Western San Joaquin Valley: A C-WIN Policy Brief

California Water Impact Network (C-WIN) | January 1st, 2012

It is the policy of the California Water Impact Network to: •Retire poisoned lands from irrigation so that pollution from naturally high levels of contaminants such

It is the policy of the California Water Impact Network to: •Retire poisoned lands from irrigation so that pollution from naturally high levels of contaminants such as salt, selenium, boron, mercury, arsenic and molybdenum is ended. •End wasteful and unreasonable uses of water as mandated under the California Constitution. •Slow or stop the spread of contamination to drinking water supplies, aquifers and aquatic food webs (including those with anadromous fish) where it now occurs, thereby protecting human and public health. •Redirect as much as 4 million acre-­feet of fresh water freed from retired lands to other beneficial uses within the Central Valley watershed, including fish and wildlife refuges, Delta ecosystem restoration and instream flows, and drought-­period municipal uses. •Require that solutions for retiring the poisoned lands from irrigation result in either no net change or an actual net decrease in energy consumption associated with use of those lands.

Review of and recommendations for monitoring contaminants and their effects in the San Francisco Bay−Delta

University of California, Davis (UC Davis) | December 3rd, 2019

Legacy and current-use contaminants enter into and accumulate throughout the San Francisco Bay−Delta (Bay−Delta), and are present at concentrations with known effects

Legacy and current-use contaminants enter into and accumulate throughout the San Francisco Bay−Delta (Bay−Delta), and are present at concentrations with known effects on species important to this diverse watershed. There remains major uncertainty and a lack of focused research able to address and provide understanding of effects across multiple biological scales, despite previous and ongoing emphasis on the need for it. These needs are challenging specifically because of the established regulatory programs that often monitor on a chemical-by-chemical basis, or in which decisions are grounded in lethality-based endpoints. To best address issues of contaminants in the Bay−Delta, monitoring efforts should consider effects of environmentally relevant mixtures and sub-lethal impacts that can affect ecosystem health. These efforts need to consider the complex environment in the Bay−Delta, including variable abiotic (e.g., temperature, salinity) and biotic (e.g., pathogens) factors. This calls for controlled and focused research, and the development of a multi-disciplinary contaminant monitoring and assessment program that provides information across biological scales. Information gained in this manner will contribute toward evaluating parameters that could alleviate ecologically detrimental outcomes. This review is a result of a Special Symposium convened at the University of California−Davis (UCD) on January 31, 2017 to address critical information needed on how contaminants affect the Bay−Delta. The UCD Symposium focused on new tools and approaches for assessing multiple stressor effects to freshwater and estuarine systems. Our approach is similar to the recently proposed framework laid out by the U.S. Environmental Protection Agency (USEPA) that uses weight of evidence to scale toxicological responses to chemical contaminants in a laboratory, and to guide the conservation of priority species and habitats. As such, we also aimed to recommend multiple endpoints that could be used to promote a multi-disciplinary understanding of contaminant risks in Bay−Delta while supporting management needs.