North American diadromous fishes: Drivers of decline and potential for recovery in the Anthropocene

American Association for the Advancement of Science (AAAS) | January 28th, 2022

Diadromous fishes migrate between freshwater and marine habitats to complete their life cycle, a complexity that makes them vulnerable to the adverse effects of current

Diadromous fishes migrate between freshwater and marine habitats to complete their life cycle, a complexity that makes them vulnerable to the adverse effects of current and past human activities on land and in the oceans. Many North American species are critically endangered, and entire populations have been lost. Major factors driving declines include overfishing, pollution, water withdrawals, aquaculture, non-native species, habitat degradation, over-zealous application of hatcheries designed to mitigate effects of other factors, and effects of climate change. Perhaps, the most broadly tractable and effective factors affecting diadromous fishes are removals of the dams that prevent or hinder their migrations, alter their environment, and often favor non-native biotic communities. Future survival of many diadromous fish populations may depend on this.

North Bay Mercury Biosentinel Project 2016 - 2017

San Francisco Estuary Institute (SFEI) | March 1st, 2018

Concentrations of methylmercury throughout San Francisco Bay are high enough to warrant concern for the health of humans and wildlife. Large-scale tidal wetland restorat

Concentrations of methylmercury throughout San Francisco Bay are high enough to warrant concern for the health of humans and wildlife. Large-scale tidal wetland restoration is currently being implemented as a means of increasing populations of wildlife species of concern. There is concern that these restoration activities may lead to increased concentrations of methylmercury in the estuarine food web and exacerbate the existing methylmercury problem.

Not All Rivers Are Created Equal: The Importance of Spring-Fed Rivers under a Changing Climate

Water (MDPI) | June 12th, 2021

In the Western United States, volcanic spring-fed rivers are anticipated to become increasingly more important for salmonids and other native fishes, as these rivers wil

In the Western United States, volcanic spring-fed rivers are anticipated to become increasingly more important for salmonids and other native fishes, as these rivers will retain cold-water habitats as the climate warms. Despite this, little is known about the hydro-biogeochemical interactions within these ecosystems. A review of existing literature on spring-fed rivers, coupled with a decade of research on volcanic spring-fed rivers of northern California, finds that these systems are exceptionally productive and exhibit stable environmental conditions. These unique conditions stem from hydrogeologic processes typical of young volcanic terrains. Aquatic macrophytes, common to some nutrient-rich spring-fed systems, play a disproportionate role in hydrologic and geomorphic processes by facilitating ecological interactions and velocity conditions that improve juvenile salmonid growth. We find that volcanic spring-fed rivers are also resilient to climate change, due not only to their ability to dampen water temperature changes through deep groundwater flow but also because of their nutrient-driven high ecosystem productivity, which may enable cold-water species to metabolically compensate for marginal increases in water temperature. Understanding the fundamental geomorphic and ecological differences between these rare ecosystems and their numerically dominant runoff rivers is essential for developing long-term conservation strategies for cold-water species under a rapidly changing climate.

Notice of Entry of Order for Implementation of Preliminary Injunction – Case No. Bcv-22-103220-Gap, Bring Back the Kern et al v. City of Bakersfield et al

Superior Court of California, County of Kern | November 14th, 2023

Novel aquatic ecosystems: The new reality for streams in California and other Mediterranean climate regions

River Research and Applications (Wiley) | September 24th, 2013

Temporary streams in California and other Mediterranean climate areas are among the aquatic habitats most altered by human actions and by invasions by alien species. They

Temporary streams in California and other Mediterranean climate areas are among the aquatic habitats most altered by human actions and by invasions by alien species. They typically support novel ecosystems, defined as ecosystems dominated by new combinations of organisms in highly altered habitats. Although these new ecosystems have many attributes of the ecosystems they replaced, such as native species, they typically contain many new interactions among species. Managers need to recognize this reality to find ways to direct change towards novel ecosystems with desirable features, including native species. The concept of reconciliation ecology is a practical approach to living with the new reality; it includes actively guiding ecosystem change, as illustrated by Putah Creek, Cosumnes River, Eel River and Six Bit Gulch in California. The first three waterways are all highly altered and managed with varying degrees of success to favour desired aquatic species, whereas Six Bit Gulch experiences such extreme conditions that the original ecosystem is still largely intact. The examples illustrate that most aquatic ecosystems in California are so highly altered that attempting to restore them to an earlier condition or stable state is largely not possible. Where more or less intact systems persist, it is usually because extreme environmental conditions restrict both alien invaders and human use in small watersheds. This pattern appears to be fairly typical of streams in Mediterranean climate areas.

Nutrient Fluxes from Sediments in the San Francisco Bay Delta

Estuaries and Coasts (Springer) | January 1st, 2014

In September 2011 and March 2012, benthic nutrient fluxes were measured in the San Francisco Bay Delta, across a gradient from above the confluence of the Sacramento and

In September 2011 and March 2012, benthic nutrient fluxes were measured in the San Francisco Bay Delta, across a gradient from above the confluence of the Sacramento and San Joaquin Rivers to Suisun Bay. Dark and illuminated core incubation techniques were used to mea- sure rates of denitrification, nutrient fluxes (phosphate, ammonium, nitrate), and oxygen fluxes. While benthic nutrient fluxes have been assessed at several sites in northern San Francisco Bay, such data across a Delta–Bay transect have not previously been determined. Average September rates of DIN (nitrate, nitrite, ammonium) flux were net positive across all sites, while March DIN flux indicated net uptake of DIN at some sites. Denitrification rates based on the N2/Ar ratio approach were between 0.6 and 1.0 mmol m−2 day−1, similar to other mesotrophic estuarine sediments. Coupled nitrifica- tion–denitrification was the dominant denitrification pathway in September, with higher overlying water nitrate concentra- tions in March resulting in denitrification driven by nitrate flux into the sediments. Estimated benthic microalgal productivity was variable and surprisingly high in Delta sediments and may represent a major source of labile carbon to this ecosystem. Variable N/P stoichiometry was observed in these sediments, with deviations from Redfield driven by processes such as denitrification, variable light/dark uptake of nutrients by microalgae, and adsorption of soluble reactive phosphorus.

Oases of the future? Springs as potential hydrologic refugia in drying climates

Ecological Society of America (Wiley) | June 1st, 2020

Natural springs in water‐limited landscapes are biodiversity hotspots and keystone ecosystems that have a disproportionate influence on surrounding landscapes despite t

Natural springs in water‐limited landscapes are biodiversity hotspots and keystone ecosystems that have a disproportionate influence on surrounding landscapes despite their usually small size. Some springs served as evolutionary refugia during previous climate drying, supporting relict species in isolated habitats. Understanding whether springs will provide hydrologic refugia from future climate change is important to biodiversity conservation but is complicated by hydrologic variability among springs, data limitations, and multiple non‐climate threats to groundwater‐dependent ecosystems. We present a conceptual framework for categorizing springs as potentially stable, relative, or transient hydrologic refugia in a drying climate. Clues about the refugial capacity of springs can be assembled from various approaches, including citizen‐science‐powered ecohydrologic monitoring, remote sensing, landowner interviews, and environmental tracer analysis. Managers can integrate multiple lines of evidence to predict which springs may become future refugia for species of concern, strengthening the long‐term effectiveness of their conservation and restoration, and informing climate adaptation for terrestrial and freshwater species.

Observations of the spawning ecology of the imperiled Clear Lake Hitch

California Department of Fish and Wildlife (CDFW) | October 13th, 2019

Observed and anticipated impacts of drought on forest insects and diseases in the United States

Forest Ecology and Management (Elsevier) | May 11th, 2016

Future anthropogenic-induced changes to the earth’s climate will likely include increases in temperature and changes in precipitation that will increase the fre

Future anthropogenic-induced changes to the earth’s climate will likely include increases in temperature and changes in precipitation that will increase the frequency and severity of droughts. Insects and fungal diseases are important disturbances in forests, yet understanding of the role of drought in outbreaks of these agents is limited. Current knowledge concerning the effects of drought on herbivorous insect and pathogen outbreaks in U.S. forests is reviewed, and compared between the relatively mesic and structurally diverse forests of the eastern U.S. and the more xeric forests of the western U.S. Theory and limited evidence suggests a non-linear relationship between drought intensity and outbreaks of aggressive bark beetle species (i.e., those capable of causing extensive levels of tree mortality), where moderate droughts reduce bark beetle population performance and subsequent tree mortality, whereas intense droughts, which frequently occur in the western U.S., increase bark beetle performance and tree mortality. There is little evidence for a role of drought in outbreaks of the southern pine beetle (Dendroctonus frontalis), the only bark beetle species that causes large amounts of tree mortality in the eastern U.S. Defoliators do not show consistent responses to drought. The response of sap-feeders to drought appears non-linear, with the greatest performance and impacts at intermediate drought intensity or when drought is alleviated by wetter periods. Interactions between tree pathogens and drought are poorly understood, but available evidence suggests reduced pathogen performance and host impacts in response to drought for primary pathogens and pathogens whose lifecycle depends directly on mois- ture (humidity). In these cases, rates of reproduction, spread, and infection tend to be greater when conditions are moist. In contrast, secondary fungal pathogens (i.e., those that depend on stressed hosts for colonization) are anticipated to respond to drought with greater performance and host impacts. In the western U.S., drought increases stress on trees severely infected by mistletoes thereby predisposing mistletoe-infected trees to attack by insects, particularly bark beetles and wood borers. Research needed to advance understanding of drought impacts on forest insects and diseases, and the role of forest man- agement in mitigation of infestations during drought are discussed.

Ocean Climate Indicators: A Monitoring Inventory and Plan for Tracking Climate Change in the North-central California Coast and Ocean Region

Gulf of the Farallones National Marine Sanctuary Advisory Council | August 14th, 2014

The impacts of climate change, defined as increasing atmospheric and oceanic carbon dioxide and associated increases in average global temperature and oceanic a

The impacts of climate change, defined as increasing atmospheric and oceanic carbon dioxide and associated increases in average global temperature and oceanic acidity, have been observed both globally and on regional scales, such as in the North-central California coast and ocean, a region that extends from Point Arena to Point Año Nuevo and includes the Pacific coastline of the San Francisco Bay Area. Because of the high economic and ecological value of the region’s marine environment, the Gulf of the Farallones National Marine Sanctuary (GFNMS) and other agencies and organizations have recognized the need to evaluate and plan for climate change impacts.