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A Summary of Water-Quality and Salt Marsh Monitoring, Humboldt Bay, California

U.S. Geological Survey (USGS) | September 16th, 2022

Summary

This report summarizes data-collection activities associated with the U.S. Geological Survey Humboldt Bay Water-Quality and Salt Marsh Monitoring Project. This work was u

This report summarizes data-collection activities associated with the U.S. Geological Survey Humboldt Bay Water-Quality and Salt Marsh Monitoring Project. This work was undertaken to gain a comprehensive understanding of water-quality conditions, salt marsh accretion processes, marsh-edge erosion, and soil-carbon storage in Humboldt Bay, California. Multiparameter sondes recorded water temperature, specific conductance, and turbidity at a 15-minute timestep at two U.S. Geological Survey water-quality stations: (1) Mad River Slough near Arcata, California (U.S. Geological Survey station 405219124085601) and (2) Hookton Slough near Loleta, California (U.S. Geological Survey station 404038124131801). At each station, discrete water samples were collected to develop surrogate regression models that were used to compute a continuous time series of suspended-sediment concentration from continuously measured turbidity. Data loggers recorded water depth at a 6-minute timestep in the primary tidal channels (Mad River Slough and Hookton Slough) in two adjacent marshes (Mad River marsh and Hookton marsh). The marsh monitoring network included five study marshes. Three marshes (Mad River, Manila, and Jacoby) are in the northern embayment of Humboldt Bay and two marshes (White and Hookton) are in the southern embayment. Surface deposition and elevation change were measured using deep rod surface elevation tables and feldspar marker horizons. Sediment characteristics and soil-carbon storage were measured using a total of 10 shallow cores, distributed across 5 study marshes, collected using an Eijkelkamp peat sampler. Rates of marsh edge erosion (2010–19) were quantified in four marshes (Mad River, Manila, Jacoby, and White) by estimating changes in the areal extent of the vegetated marsh plain using repeat aerial imagery and light detection and ranging (LiDAR)-derived elevation data. During the monitoring period (2016–19), the mean suspended-sediment concentration computed for Hookton Slough (50±20 milligrams per liter [mg/L]) was higher than Mad River Slough (18±7 mg/L). Uncertainty in mean suspended-sediment concentration values is reported using a 90-percent confidence interval. Across the five study marshes, elevation change (+1.8±0.6 millimeters per year [mm/yr]) and surface deposition (+2.5±0.5 mm/yr) were lower than published values of local sea-level rise (4.9±0.8 mm/yr), and mean carbon density was 0.029±0.005 grams of carbon per cubic centimeter. From 2010 to 2019, marsh edge erosion and soil carbon loss were greatest in low-elevation marshes with the marsh edge characterized by a gentle transition from mudflat to vegetated marsh (herein, ramped edge morphology) and larger wind-wave exposure. Jacoby Creek marsh experienced the greatest edge erosion. In total, marsh edge erosion was responsible for 62.3 metric tons of estuarine soil carbon storage loss across four study marshes. Salt marshes are an important component of coastal carbon, which is frequently referred to as “blue carbon.” The monitoring data presented in this report provide fundamental information needed to manage blue carbon stocks, assess marsh vulnerability, inform sea-level rise adaptation planning, and build coastal resiliency to climate change.

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A Synthesis of Aquatic Science for Management of Lakes Mead and Mohave

U.S. Geological Survey (USGS) | January 29th, 2013

Summary

Lakes Mead and Mohave, which are the centerpieces of Lake Mead National Recreation Area, provide many significant benefits that have made the modern development of the So

Lakes Mead and Mohave, which are the centerpieces of Lake Mead National Recreation Area, provide many significant benefits that have made the modern development of the Southwestern United States possible. Lake Mead is the largest reservoir by volume in the nation and it supplies critical storage of water supplies for more than 25 million people in three Western States (California, Arizona, and Nevada). Storage within Lake Mead supplies drinking water and the hydropower to provide electricity for major cities including Las Vegas, Phoenix, Los Angeles, Tucson, and San Diego, and irrigation of more than 2.5 million acres of croplands. Lake Mead is arguably the most important reservoir in the nation because of its size and the services it delivers to the Western United States. This Circular includes seven chapters. Chapter 1 provides a short summary of the overall findings and management implications for Lakes Mead and Mohave that can be used to guide the reader through the rest of the Circular. Chapter 2 introduces the environmental setting and characteristics of Lakes Mead and Mohave and provides a brief management context of the lakes within the Colorado River system as well as overviews of the geological bedrock and sediment accumulations of the lakes. Chapter 3 contains summaries of the operational and hydrologic characteristics of Lakes Mead and Mohave. Chapter 4 provides information on water quality, including discussion on the monitoring of contaminants and sediments within the reservoirs. Chapter 5 describes aquatic biota and wildlife, including food-web dynamics, plankton, invertebrates, fish, aquatic birds, and aquatic vegetation. Chapter 6 outlines threats and stressors to the health of Lake Mead aquatic ecosystems that include a range of environmental contaminants, invasive species, and climate change. Chapter 7 provides a more detailed summary of overall findings that are presented in Chapter 1; and it contains a more detailed discussion on associated management implications, additional research, and monitoring needs.

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Agricultural Land Stewardship (Resource Management Strategy)

California Department of Water Resources (DWR) | July 29th, 2016

Summary

This resource management strategy focuses primarily on private land in agriculture including cultivated land and rangeland. Agricultural land in California comprises abou

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American and Sacramento Rivers, California, Erodibility Measurements and Model

U.S. Geological Survey (USGS) | August 11th, 2021

Summary

A previous report by the authors described sediment sampling and drilling by the U.S. Geological Survey (USGS) beside the American and Sacramento Rivers near Sacramento,

A previous report by the authors described sediment sampling and drilling by the U.S. Geological Survey (USGS) beside the American and Sacramento Rivers near Sacramento, California, in support of a U.S. Army Corps of Engineers project focused on regional flood control. The drilling was performed to define lithology, extract samples for laboratory testing, and perform borehole erosion tests (BETs). The U.S. Department of Agriculture (USDA) performed jet erodibility tests (JETs) near each drilling site, and a team from Texas A&M University performed laboratory tests with an erosion function apparatus (EFA). Collectively, the effort was intended to reveal spatial variations in sediment erodibility and provide data for use in a model to simulate morphological response to a major flood. The data collected by the USGS are available in a public data release. This report, developed in cooperation with the U.S. Army Corps of Engineers, provides comparisons of the three types of measurements of the erodibility of riverbed sediments. The BET is performed in the field and reveals erodibility of sediments below the bed surface. The JET is likewise performed in the field but reveals only erodibility of exposed sediments. The EFA test is done in the laboratory and was performed on soils extracted from different depths beneath the bed surface, in many cases reconstituted for laboratory testing. Tests were performed at nominally similar locations but differed by meters to tens of meters in horizontal locations. The comparison was undertaken to investigate differences among results obtained by the individual measurement approaches and to elucidate pros and cons of each method. The critical shear stress to initiate erosion and the rate of change of erosion rate per unit increase of excess shear stress, sometimes referred to as the erosion coefficient, served as the primary basis for comparison. The three test methods in some cases resulted in order of magnitude differences in estimates of these parameters. Some differences could be attributed to variances in site location or result from testing surface sediment versus a deeper layer, but systematic differences are also evident in the results. The tests performed in the laboratory using the EFA resulted in much lower values of critical shear stress and much higher values of the erosion coefficient compared to the JET tests performed by the USDA team on surface sediments. Critical shear stress was poorly resolved in the BET results because of the limited number of results per site, but the erosion coefficients derived from BET results were systematically lower than those obtained using the EFA. A new, simplified approach is also proposed to estimate the increase in channel cross-sectional area during a large flood, given data describing the initial river cross section, riverbed erodibility parameters, and peak flood discharge and duration. The model runs until the cross section erodes to an equilibrium condition or the flood ends. Output describes the area of the cross section at the end of the simulation and the time required to reach equilibrium if it was reached within the simulated period. The model assumes unique, constant values for both the critical shear stress and the erosion coefficient and represents the fluid mechanics in a simplified way, making it of limited value for quantitative predictions. It does, however, provide an indication of which cross sections are most likely to undergo the greatest change in the design event and can be used to investigate sensitivity of erosion predictions to variability in sediment erodibility measurements.

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Amplification of downstream flood stage due to damming of fine-grained rivers

Nature Portfolio (Springer Nature) | June 1st, 2022

Summary

River dams provide many benefits, including flood control. However, due to constantly evolving channel morphology, downstream conveyance of floodwaters following dam clo

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Amplified Impact of Climate Change on Fine-Sediment Delivery to a Subsiding Coast, Humboldt Bay, California

Estuaries and Coasts (Springer) | May 28th, 2021

Summary

In Humboldt Bay, tectonic subsidence exacerbates sea-level rise (SLR). To build surface elevations and to keep pace with SLR, the sediment demand created by subsi

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An overview of multi-dimensional models of the Sacramento-San Joaquin Delta

University of California, Davis (UC Davis) | December 1st, 2016

Summary

Over the past fifteen years, the development and application of models in San Francisco Bay and the Sacramento-San Joaquin Delta has transformed our ability to analyze an

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Anthropogenic and geologic causes of anomalously high uranium concentrations in groundwater used for drinking water supply in the southeastern San Joaquin Valley, CA

Journal of Hydrology (Elsevier) | October 1st, 2019

Summary

Concentrations of uranium (U) >30 µg/L in groundwater are relatively uncommon in drinking water in the United States but can be of concern in those areas where comp

Concentrations of uranium (U) >30 µg/L in groundwater are relatively uncommon in drinking water in the United States but can be of concern in those areas where complex interactions of aquifer materials and anthropogenic alterations of the natural flow regime mobilize U. High concentrations (>30 µg/L) of U in the southeastern San Joaquin Valley, California, USA, have been detected in 24 percent of 257 domestic, irrigation, and public-supply wells sampled across an approximately 110,000 km2 area. In this study we evaluated mechanisms for mobilization of U in the San Joaquin Valley proposed in previous studies, confirming mobilization by HCO3 and refuting mobilization by NO3 and we refined our understanding of the geologic sources of U to the scale of individual alluvial fans. The location of high concentrations depends on the interactions of geological U sources from fluvial fans that originate in the Sierra Nevada to the east and seepage of irrigation water that contains high concentrations of HCO3 that leaches U from the sediments. In addition, interactions with PO4 from fertilized irrigated fields may sequester U in the aquifer. Principal component analysis of the data demonstrates that HCO3 and ions associated with high total dissolved solids in the aquifer and the percentage of agriculture near the well sampled are associated with high U concentrations. Nitrate concentrations do not appear to control release of U to the aquifer. Age dating of the groundwater and generally increasing U concentrations of the past 25  years in resampled wells where irrigation is prevalent suggests that high U concentrations are associated with younger water, indicating that irrigation of fields over the past 100  years has significantly contributed to increasing concentrations and mobilizing U. In some places, the groundwater is supersaturated with uranyl-containing minerals, as would be expected in roll front deposits. In general, the interaction of natural geological sources high in U, the anthropogenically driven addition of HCO3 and possibly phosphate fertilizer, control the location and concentration of U in each individual fluvial fan, but the addition of nitrate in fertilizer does not appear control the location of high U. These geochemical interactions are complex but can be used to determine controls on anomalously high U in alluvial aquifers.

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Anthropogenic Stressors and Changes in the Clear Lake Ecosystem as Recorded in Sediment Cores

Ecological Society of America (Wiley) | December 1st, 2008

Summary

Sediment cores were collected to investigate multiple stresses on Clear Lake, California, USA, through the period of European occupation to the present day. Earlier wor

Sediment cores were collected to investigate multiple stresses on Clear Lake, California, USA, through the period of European occupation to the present day. Earlier workers suggested the hypothesis that the use of mechanized earthmoving equipment, starting in the 1920s and 1930s, was responsible for erosion, mercury (Hg) contamination, and habitat loss stresses. Cores (;2.5 m in depth) were collected in 1996 and 2000 from each of the three arms of the lake. Carbon-14 dating suggests that these cores represent as much as 3000 years of the lake’s history, beginning long before European settlement. Total mercury (TotHg) and methylmercury (MeHg), dry matter, water, carbon, nitrogen, phosphorus, sulfur, and the stable isotopes 13C and 15N were measured at 5-cm intervals. Nearly all parameters show major changes at depths of 58–135 cm, beginning at ca. 1927 (dated with 210Pb). Accepting this date for concomitant major changes in seven cores yields an estimated 8.6 mm/yr average sedimentation rate after 1927. Pre-1927 sedimentation rates were ;1 mm/yr. Total mercury and MeHg, dry matter, phosphorus, and 15N increase significantly, whereas nitrogen, sulfur, carbon, and water content decrease significantly above the 1927 horizon. Both TotHg and MeHg show extremely large increases (roughly 10-fold) above the 1927 horizon. A peak in inorganic deposition rate and minimum values for percentage of water is present at depths corresponding to ca. 1970. Interestingly, the first 75 years of European settlement in the Clear Lake basin (including the most productive years of the Sulphur Bank Mercury Mine) appeared to have had undetectable effects on lake cores. Changes since 1927 were dramatic. The large increase in Hg beginning about 1927 corresponds to the use of heavy equipment to exploit the ore deposit at the mine using open-pit methods. Increases in sediment deposition from increased earthmoving in the basin and sulfate loading from the mine are the most likely explanations for the dramatic changes seen in the post-1927 sections of the cores.

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Bed-Material Characteristics of the Sacramento–San Joaquin Delta, California, 2010–13

U.S. Geological Survey (USGS) | January 9th, 2017

Summary

The characteristics of bed material at selected sites within the Sacramento–San Joaquin Delta, California, during 2010–13 are described in a study conducted by the U.

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A Summary of Water-Quality and Salt Marsh Monitoring, Humboldt Bay, California

A Synthesis of Aquatic Science for Management of Lakes Mead and Mohave

Agricultural Land Stewardship (Resource Management Strategy)

American and Sacramento Rivers, California, Erodibility Measurements and Model

Amplification of downstream flood stage due to damming of fine-grained rivers

Amplified Impact of Climate Change on Fine-Sediment Delivery to a Subsiding Coast, Humboldt Bay, California

An overview of multi-dimensional models of the Sacramento-San Joaquin Delta

Anthropogenic and geologic causes of anomalously high uranium concentrations in groundwater used for drinking water supply in the southeastern San Joaquin Valley, CA

Anthropogenic Stressors and Changes in the Clear Lake Ecosystem as Recorded in Sediment Cores

Bed-Material Characteristics of the Sacramento–San Joaquin Delta, California, 2010–13

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