San Joaquin River

Delta Vision Strategic Plan -- from Phil Isenberg, 1939-2023

State of California | October 17th, 2008

When it was created by Governor Schwarzenegger’s Executive Order S-17-06 in 2006, the charge of the Delta Vision Blue Ribbon Task Force (Task Force) was nothing less th

When it was created by Governor Schwarzenegger’s Executive Order S-17-06 in 2006, the charge of the Delta Vision Blue Ribbon Task Force (Task Force) was nothing less than to create a vision to repair the ecological damage to the Sacramento-San Joaquin River Delta (Delta), and then prepare a strategic plan which would sustain the Delta in future decades while ensuring a reliable water supply for the two-thirds of California’s population who depend in whole or in part on water from the Delta.

Delta Water Facilities Peripheral Canal Preliminary Design Report (Draft Copy)

California Department of Water Resources (DWR) | July 31st, 1973

Delta Working Landscapes: Public and Private Partnerships for Habitat

Delta Protection Commission (DPC) | October 1st, 2012

The Delta Working Landscapes Program (Program) is a group of projects which demonstrate how farmers can integrate habitat restoration into farming practices. The objec

The Delta Working Landscapes Program (Program) is a group of projects which demonstrate how farmers can integrate habitat restoration into farming practices. The objectives of the Program are to improve the environmental quality of existing landscapes in the Delta; coordinate programs with local farmers; understand the social, economic, environmental and governmental policy hurdles and/or incentives to perform conservation practices; and communicate to farmers the advantages of implementing wildlife friendly agricultural practices. The Delta Protection Commission was awarded a three year grant to construct the program through the California Bay-Delta Program in 2005. Program partners included Hart Restoration (Hart) and Ducks Unlimited (DU). Hart established vegetative buffers along irrigation ditch banks and hedgerow grass plantings. These plantings were designed to provide habitat for wildlife, improve water quality by reducing runoff of pesticides and sediment, enhance levee stability, and retard levee erosion. DU coordinated restoration enhancement projects which included creating seasonal and permanent wetlands on marginal farmlands. These projects provide waterfowl brooding habitat, a food source, and additional habitat sites which promote healthier waterfowl flocks. To date, these projects total 312 acres of seasonal and permanent wetlands and 6.5 miles of enhanced levees and waterways. Many of the revegetated areas are thriving with native plant life, have been repopulated by wildlife, and filter agricultural drainage which improves water quality and enhances levee stability. Multiple species of waterfowl are using the restoration habitats for brooding and feeding as well as staying later into the season. Challenges to Working Landscapes projects include prior long term use of pesticides and herbicides which have created a hostile environment for native plants and wildlife. Additionally, some cultural practices are not conducive to habitat creation such as practices which rely on herbicides instead of tillage. Furthermore, economic costs are affiliated with physical land alterations, and in some cases permit requirements are cumbersome. Despite these challenges, successful public/private partnerships are possible. Working Landscapes projects can be expanded through better communication between policy and regulatory agencies and publicizing successful projects.

Delta-Estuary California's Inland Coast A Public Trust Report

California State Lands Commission (SLC) | May 1st, 1991

Delta-Mendota Canal Recirculation Feasibility Study Plan Formulation Report

U.S. Bureau of Reclamation (USBR) | September 30th, 2010

The U.S. Department of the Interior, Bureau of Reclamation (Reclamation) is evaluating the feasibility of using recirculation strategies to improve water quality and flow

The U.S. Department of the Interior, Bureau of Reclamation (Reclamation) is evaluating the feasibility of using recirculation strategies to improve water quality and flow in the lower San Joaquin River (SJR). Specifically, Reclamation is evaluating the feasibility of the Delta-Mendota Canal (DMC) Recirculation Project (Project) in which water from the Sacramento–San Joaquin River Delta (Delta) would be recirculated through the Central Valley Project (CVP) pumping and conveyance facilities to the SJR upstream from Vernalis. The DMC, which is part of the CVP, would be the primary conveyance facility utilized. The DMC is 120-mile canal that begins at the C.W. “Bill” Jones Pumping Plant (Jones) and ends at Mendota Pool, near the town of Mendota. Jones pumps water from the Delta into the canal. Water would be released from the canal into either Newman Wasteway or Westley Wasteway and would flow back into SJR near its confluence with the Merced River (Newman Wasteway) or with the Tuolumne River (Westley Wasteway). The water would re-enter the Delta near the town of Vernalis. In 2004, Reclamation initiated the DMC Recirculation Project Feasibility Study (Study). The Study is authorized by the CALFED (California Federal Bay-Delta Program) Bay-Delta Authorization Act of 2004 (118 Stat. §§ 1681-1702.; Public Law 108-361) and a similar study is required by the State Water Resources Control Board (SWRCB) as part of Water Right Decision 1641 (D-1641). The purposes of the PFR are (1) to provide information on the existing and potential resources that may be affected by the Project and (2) to present the results of the evaluation of the alternative plans that were carried forward from the 2008 Initial Alternatives Information Report (IAIR). The alternative plans are compared and ranked and the next steps in the study are presented.

Delta-Mendota Subbasin Staff Assessment

California State Water Resources Control Board (SWRCB) | March 2nd, 2026

The Delta-Mendota Subbasin (subbasin) is located in the western portion of the San Joaquin Valley, in portions of Fresno, Madera, Merced, San Joaquin, San Benito, and Sta

The Delta-Mendota Subbasin (subbasin) is located in the western portion of the San Joaquin Valley, in portions of Fresno, Madera, Merced, San Joaquin, San Benito, and Stanislaus counties, and contains the cities of Dos Palos, Firebaugh, Gustine, Los Banos, Mendota, Newman, and Patterson. It is critically overdrafted and managed by 7 GSA Groups, comprised of 23 GSAs, which include: the Aliso Water District GSA Group, the Farmers Water District GSA Group, the Fresno County Management Areas A and B GSA Group, the Grassland GSA Group, the Northern Delta-Mendota GSA Group, the Central Delta-Mendota GSA Group, and the San Joaquin River Exchange Contractors GSA Group. During most years, agriculture accounts for more than 85% of groundwater use in the subbasin (Water Year 2019–Water Year 2024 Annual Reports). The state intervention process for the Delta-Mendota Subbasin was initiated in March 2023 when DWR determined the subbasin’s six 2022 GSPs were inadequate.  The GSAs released a single revised draft GSP in May 2024, which they adopted with slight revisions in July 2024 (2024 GSP). State Water Board staff evaluated the 2024 GSP to determine if identified deficiencies were resolved. The GSAs made significant progress. State Water Board staff concludes the GSAs amended the GSP such that a probationary designation of the Delta-Mendota Subbasin is unnecessary and recommends the Board return the subbasin to DWR’s jurisdiction for continued evaluation of local management under SGMA.

Demystifying the Delta

CALFED | August 1st, 2004

Department of Fish and Game Rationale for Effects of Exports

California Department of Fish and Wildlife (CDFW) | November 2nd, 2011

This document describes the California Department of Fish and Game (DFG) methodology to quantify the surface area in the Sacramento – San Joaquin delta estuary (Delta)

This document describes the California Department of Fish and Game (DFG) methodology to quantify the surface area in the Sacramento – San Joaquin delta estuary (Delta) that is impacted by the operations of the State Water Project (SWP) and Central Valley Project (CVP) pumping facilities. In order to estimate the mitigation required to offset direct and indirect losses of Fish Species due to impacts to surface acres of aquatic habitat in the Delta accounted to the SWP Delta Pumping Facilities operations, DFG used an analysis based on conclusions and information contained in a manuscript that utilizes the Delta Simulation Model-2 Particle Tracking Model (DSM2PTM) (Kimmerer and Nobriga, 2008). This methodology provides the general loss of “particles” to the Delta which is a surrogate for loss of productivity and fish life stages vulnerable to these effects.

Design and methods of the California stream quality assessment (CSQA), 2017

U.S. Geological Survey (USGS) | April 21st, 2020

During 2017, as part of the National Water-Quality Assessment Project, the U.S. Geological Survey conducted the California Stream Quality Assessment to investigate the qu

During 2017, as part of the National Water-Quality Assessment Project, the U.S. Geological Survey conducted the California Stream Quality Assessment to investigate the quality of streams in the Central California Foothills and Coastal Mountains ecoregion, United States. The goal of the California Stream Quality Assessment study was to assess the health of wadeable streams in the region by characterizing multiple water-quality factors that are stressors to aquatic biota and by evaluating the relation between these stressors and biological indicators of stream health. Urbanization, agriculture, and modifications to streamflow are anthropogenic changes that affect water quality in the region; consequently, the study design primarily targeted sites and specific stressors associated with these activities. For the study, 85 stream sites were selected to represent the types and intensity of land use in the watershed; categories of site types were undeveloped, urban (low, medium, high), agriculture (low, high), and mixed (urban and agriculture). Most sites (about 70 percent) represent a gradient of urbanization from undeveloped to 99-percent urbanized. At most of the sites, streamgages or pressure transducers were used to monitor stream discharge and stage, as well as temperature. Water-quality samples were collected routinely at all sites and were analyzed for major ions, organic contaminants, nutrients, and suspended sediment. Sampling frequency varied on the basis of site type and location. Discrete water samples were collected weekly and generally 6 times per site, except for 11 undeveloped sites that were sampled only 4 times (during the last 4 weeks). Water sampling began at sites in the southern part of the study on March 13, 2017, and at sites in the northern part of the study on April 3, 2017. Passive samplers were deployed at most sites for measurement of polar organic contaminants (pesticides and pharmaceuticals). In May 2017, coincident with completion of water-quality sampling, an ecological survey was conducted at each site to assess benthic algal and macroinvertebrate communities and instream habitat. During the ecological surveys, a single composite streambed-sediment sample was collected for chemical analysis and toxicity testing. In addition, a few focused studies were done at subsets of sites, namely, measuring pesticides using small-volume automated samplers, measuring pesticides in biofilms, and sampling suspended sediments using passive samplers. This report describes the various study components and methods of the California Stream Quality Assessment, including measurements of water quality, sediment chemistry, habitat assessments, and ecological surveys, as well as procedures for sample analysis, quality assurance and quality control, and data management.

Designing a High-Frequency Nutrient and Biogeochemical Monitoring Network for the Sacramento–San Joaquin Delta, Northern California

U.S. Geological Survey (USGS) | July 11th, 2017

This report is the third in a series of three reports that provide information about how high-frequency (HF) nutrient monitoring may be used to assess nutrient inputs and

This report is the third in a series of three reports that provide information about how high-frequency (HF) nutrient monitoring may be used to assess nutrient inputs and dynamics in the Sacramento–San Joaquin Delta, California (Delta). The purpose of this report is to provide the background, principles, and considerations for designing an HF nutrient-monitoring network for the Delta to address high-priority, nutrient-management questions. The report starts with discussion of the high-priority management questions to be addressed, continues through discussion of the questions and considerations that place demands and constraints on network design, discusses the principles applicable to network design, and concludes with the presentation of three example nutrient-monitoring network designs for the Delta. For three example network designs, we assess how they would address high-priority questions that have been identified by the Delta Regional Monitoring Program (Delta Regional Monitoring Program Technical Advisory Committee, 2015). This report, along with the other two reports of this series (Kraus and others, 2017; Downing and others, 2017), was drafted in cooperation with the Delta Regional Monitoring Program to help scientists, managers, and planners understand how HF data improve our understanding of nutrient sources and sinks, drivers, and effects in the Delta. The first report in the series (Kraus and others, 2017) provides an introduction to the reasons for and fundamental concepts behind using HF monitoring measurements, including a brief summary of nutrient status and trends in the Delta and an extensive literature review showing how and where other research and monitoring programs have used HF monitoring to improve our understanding of nutrient cycling. The report covers the various technologies available for HF nutrient monitoring and presents the different ways HF monitoring instrumentation may be used for both fixed station and spatial assessments. Finally, it presents numerous examples of how HF measurements are currently (2017) being used in the Delta to examine how nutrients and nutrient cycling are related to aquatic habitat conditions.