San Joaquin River

Climate Risk-Informed Flood Inundation Mapping (CRFM) Project

California Department of Water Resources (DWR) | May 1st, 2025

The California Department of Water Resources (DWR) has identified the enhancement of flood inundation mapping under future climate conditions as a fundamental and critica

The California Department of Water Resources (DWR) has identified the enhancement of flood inundation mapping under future climate conditions as a fundamental and critical climate change adaptation strategy. Mapping serves as foundational information upon which future planning and actions depend — necessary, though insufficient, for climate resilience. This innovative study focuses on the Tuolumne River and leverages existing studies’ models, data, and tools to pioneer a risk-informed approach in creating a flood inundation mapping procedure that supports climate resilience. This study moves beyond outdated stationarity-based practices by incorporating non-stationarity into climate change projections, offering a forward-thinking solution to address the limitations of current methodologies.

Climate Warming and Water Management Adaptation for California

Climatic Change (Springer) | June 10th, 2010

The ability of California’s water supply system to adapt to long-term climatic and demographic changes is examined. Two climate warming and a historical climate

The ability of California’s water supply system to adapt to long-term climatic and demographic changes is examined. Two climate warming and a historical climate scenario are examined with population and land use estimates for the year 2100 using a statewide economic-engineering optimization model of water supply management. Methodologically, the results of this analysis indicate that for long-term climate change studies of complex systems, there is considerable value in including other major changes expected during a long-term time-frame (such as population changes), allowing the system to adapt to changes in conditions (a common feature of human societies), and representing the system in sufficient hydrologic and operational detail and breadth to allow significant adaptation. While the policy results of this study are preliminary, they point to a considerable engineering and economic ability of complex, diverse, and intertied systems to adapt to significant changes in climate and population. More specifically, California’s water supply system appears physically capable of adapting to significant changes in climate and population, albeit at a significant cost. Such adaptation would entail large changes in the operation of California’s large groundwater storage capacity, significant transfers of water among water users, and some adoption of new technologies.

Climate-Altered Wetlands Challenge Waterbird Use and Migratory Connectivity in Arid Landscapes

Nature Portfolio (Springer Nature) | March 15th, 2019

Wetlands in arid landscapes provide critical habitat for millions of migratory waterbirds across the world and throughout their annual cycle. The scope and scale

Wetlands in arid landscapes provide critical habitat for millions of migratory waterbirds across the world and throughout their annual cycle. The scope and scale of understanding avian use of these wetlands in conjunction with changes in climate are daunting yet critical to address lest we lose continent-wide migratory pathways. Here, we assess changes in waterbird use of North America’s Pacific Flyway in the Great Basin by examining water availability and climate trends over the past 100 years. We found recent (1980–2015) climate warming has significantly reduced the amount and shifted seasonality of water flowing into wetlands. Further, we found remarkable changes in waterbird species composition over time. We propose that a reduced hydroperiod and lower water quality from reduction in water level and flow limits sites used by waterbirds. These factors reduce chick survivorship as they cannot metabolize saline water, which makes suitable freshwater conditions a limiting resource. Collectively, climate-induced changes in Great Basin wetlands suggest a major shift in freshwater ecosystems, resulting in degradation of a continental migratory route. This work illustrates the importance of examining multi-scale changes in critical regional resources to understand their impact across a hemispheric flyway and provides a model to examine other flyways.

Climate-driven disturbances amplify forest drought sensitivity

Nature Portfolio (Springer Nature) | June 7th, 2024

Climate-informed hydrologic modeling and policy typology to guide managed aquifer recharge

American Association for the Advancement of Science (AAAS) | April 21st, 2021

Harvesting floodwaters to recharge depleted groundwater aquifers can simultaneously reduce flood and drought risks and enhance groundwater sustainability. However, deploy

Harvesting floodwaters to recharge depleted groundwater aquifers can simultaneously reduce flood and drought risks and enhance groundwater sustainability. However, deployment of this multibeneficial adaptation option is fundamentally constrained by how much water is available for recharge (WAFR) at present and under future climate change. Here, we develop a climate-informed and policy-relevant framework to quantify WAFR, its uncertainty, and associated policy actions. Despite robust and widespread increases in future projected WAFR in our case study of California (for 56/80% of subbasins in 2070–2099 under RCP4.5/RCP8.5), strong nonlinear interactions between diversion infrastructure and policy uncertainties constrain how much WAFR can be captured. To tap future elevated recharge potential through infrastructure expansion under deep uncertainties, we outline a novel robustness-based policy typology to identify priority areas of investment needs. Our WAFR analysis can inform effective investment decisions to adapt to future climate-fueled drought and flood risk over depleted aquifers, in California and beyond.

Climate-Smart Tools to Protect California’s Freshwater Biodiversity

Public Policy Institute of California (PPIC) | May 28th, 2024

California’s freshwater ecosystems—and the native plants and animals that rely on them—have been in decline for decades. Roughly half of California’s native fresh

California’s freshwater ecosystems—and the native plants and animals that rely on them—have been in decline for decades. Roughly half of California’s native freshwater species are highly vulnerable to extinction within this century. But efforts to protect and recover native species now face an additional serious threat: climate change, which is accelerating and compounding the impacts of past and current land and water management issues. Simply working harder, using the same insufficient approaches to conservation, is unlikely to be successful. New approaches, including some that are experimental or highly controversial, are urgently needed. Although California has recently made important strides in setting goals for salmon, the state lacks a comprehensive approach to protecting native biodiversity in the face of climate change. We have identified a portfolio of actions that can help California rise to this urgent challenge.

Collateral Damage: A citizen’s guide to fish kills and habitat degradation at the state and federal water project pumps in the Delta

Bay Institute | March 1st, 2012

Large-scale fish kills and habitat destruction aren’t an unusual occurrence at the giant federal and state pumps that export water from the Sacramento-San Joaquin Delta

Large-scale fish kills and habitat destruction aren’t an unusual occurrence at the giant federal and state pumps that export water from the Sacramento-San Joaquin Delta to agribusinesses and cities in the southern half of the state. These events are business as usual. • Every day, between 870 and 61,000 fish – including from 200 to 42,000 native and endangered fishes – are “salvaged” at the pumps. Most die in the process. • On average, over 9 million fish – representing the twenty fish species considered in this report – are “salvaged” each year at the pumps. As many as 15 million fish of all species encountered are “salvaged” each year. • Up to 40% of the total population of the endangered delta smelt and 15% of the endangered winter-run population of Chinook salmon are killed at the pumps in some years. In the first half of 2011, over 8.6 million splittail were salvaged. • Salvage estimates drastically underestimate the problem. The numbers do not factor in the results of “indirect” mortality, as high levels of export pumping disrupt fish migration, shrink the amount of non-lethal habitat available to fish species, and remove vast amounts of biomass, including fish eggs and larvae too small to be screened at the pumps. • Export pumping causes the lower San Joaquin River to flow backwards most of the year and removes the equivalent of 170 railroad boxcars of water – and the accompanying fish, other organisms, and nutrients – from the Delta ecosystem every minute. • Large numbers of fish being entrained is a problem even for species that are not currently listed as “endangered.” Killing large numbers of fish year after year cuts off population growth in response to favorable conditions and can start the species on a downward path to extinction. As the species declines, the population impacts of entrainment become proportionately larger. • Entrainment is a real problem. But the same interests in the Delta export community who claim that it isn’t also back constructing expensive new conveyance facilities such as a peripheral canal or tunnel to solve the problem that they say doesn’t exist.

Comments of San Francisco Baykeeper et al re: Draft Staff Report on Sacramento/Delta Updates

San Francisco Baykeeper | January 19th, 2024

In the face of a growing and severe ecological crisis, the Board has spent the better part of two decades crafting updates to the Bay-Delta Plan to reasonably protect fi

In the face of a growing and severe ecological crisis, the Board has spent the better part of two decades crafting updates to the Bay-Delta Plan to reasonably protect fish and wildlife beneficial uses. These delayed and too often meager efforts have so far done nothing to reverse the catastrophic path we are on, despite the potential permanent loss of these beneficial uses. The Draft Staff Report’s proposed project and the Voluntary Agreement alternatives will not change our course.

Comments on and Protest of Temporary Urgency Change Petition Regarding Delta Water Quality

California State Water Resources Control Board (SWRCB) | February 17th, 2023

Comments on the Delta Conveyance Project Draft Environmental Impact Statement

Delta Stewardship Council (Delta Council) | March 15th, 2023